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Table 4 Divergence among the human, cynomolgus, and rhesus genes

From: Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta

Model without ancestral polymorphisms (Raw data)
Lineagea K a (± S.E.) K s (± S.E.)
H-O 1.06 × 10-2 (3.20 × 10-4) 6.82 × 10-2 (1.07 × 10-3)
C-O 1.02 × 10-3 (4.79 × 10-5) 3.04 × 10-3 (1.20 × 10-4)
R-O 4.98 × 10-4 (3.36 × 10-5) 2.50 × 10-3 (1.15 × 10-4)
Model with ancestral polymorphisms
  2tub(± S.E.) 4N e ub (± S.E.)
Raw data 2.13 × 10-3 (2.24 × 10-4) 3.27 × 10-3 (2.52 × 10-4)
PCR error corrected 1.81 × 10-3 (2.12 × 10-4) 3.11 × 10-3 (2.40 × 10-4)
  1. aH: human, C: cynomolgus macaque, R: rhesus macaque, O: cynomolgus-rhesus ancestor (see Fig. 7).
  2. bt: time after speciation; u: mutation rate; N e : effective population size of the cynomolgus-rhesus ancestor.