Table 1 Tumor suppressor genes in human and mouse
From: Prediction-based approaches to characterize bidirectional promoters in the mammalian genome
BOC gene | Bidirectional partner | Annotation of partner | Distance between TSSs | CpG island at TSSs |
|---|---|---|---|---|
BARD1 (Human) | DA865307 | mRNA, EST | 518 | Across/First exon of both |
BARD1 (Mouse) | AK007117 | mRNA | -425 | Across/First exon of both |
BRCA1 (Human) | NBR2 | KG, mRNA, EST | 81 | Inside NBR2 |
BRCA1 (Mouse) | NBR1 | KG, mRNA, EST | 259 | No CpG |
BRCA2 (Human) | DR731263 | EST | 955 | Overlaps First Exon of BRCA2 |
BRCA2 (Mouse) | CO801197 | EST | 2505 | Overlaps First Exon of BRCA2 |
CHK2 (Human) | HSC20 | KG, EST | 32 | Overlaps First Exon of both |
CHK2 (Mouse) | AW049829 | KG, mRNA, EST | 276 | Across/First exon of both |
ERBB2 (Human) | Perld1 | KG, mRNA, EST | 60 | Overlaps First Exon of both |
ERBB2 (Mouse) | Perld1 | KG, mRNA, EST | 11,994 | CpG at first exon of both |
P53 (Human) | AK001247 | KG, mRNA, EST | 491 | Overlaps First Exon of P53 Partner |
P53 (Mouse) | WDR79 | KG, mRNA, EST | 657 | Across/First exon of both |
FANCA (Human) | Spisre2 | mRNA, EST | 1,533 | Overlaps First Exon of both |
FANCA (Mouse) | Spisre2 | KG, mRNA, EST | 14,137 | CpG at first exon of both |
FANCB (Human) | MOSPD2 | KG, mRNA, EST | 372 | Across/First exon of both |
FANCB (Mouse) | AK035985 | KG, mRNA, EST | 257 | No CpG |
FANCD2 (Human) | BC043599 | KG, mRNA, EST | 64 | Across/First exon of both |
FANCD2 (Mouse) | Tmem111 | KG, mRNA, EST | 47 | Across/First exon of both |
FANCF (Human) | GAS2 | mRNA, EST | -199 | Across/First exon of both |
FANCF (Mouse) | AK014509 | mRNA | 1,966 | Overlaps First Exon of FANCF partner |