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Table 2 Biclustering results of different methods for simulated data with realistic characteristics

From: Bayesian biclustering of gene expression data

  Sensitivity Specificity Overlapping rate # of clusters
ISA (0.6, 1) 0.98 0.70 0.76 0.78 0.51 0.65 7.2 9.8
ISA (0.6, 1.2) 0.90 0.75 0.79 0.73 0.57 0.57 11.2 13
ISA (0.7, 1.1) 0.94 0.76 0.80 0.79 0.48 0.59 8.3 10.9
SAMBA 0.38 0.28 0.99 0.99 0.37 0.37 5.8 5.3
CC* 0.84 0.70 0.15 0.25 0.02 0.01 10 10
OPSMs 0.21 0.16 0.91 0.91 0.35 0.35 9.3 8.9
Plaid 1.00 0.99 0.48 0.61 0.30 0.18 5 2.9
BBC** 1 0.97 0.99 0.97 0 0 2 2
  1. Note: *In CC's method, the number of clusters is preset to be 10. **In BBC, the overlapping rate is automatically 0.