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Figure 2 | BMC Genomics

Figure 2

From: A stable iterative method for refining discriminative gene clusters

Figure 2

The analysis of the three-fold cross validation performance of the algorithm on the Leukemia dataset. The dotted lines indicate the performance values in individual tests. The solid lines indicate the average values; and the dotted lines indicate one standard deviation from the averages. The X-axis represents the number of genes in S i . (a) The classification accuracy θ test on the test samples. (b) The classification accuracy θ train on the training samples. (c) The p-values ρ S (i) based on d ¯ ( A i , Δ 1 ) MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGafmizaqMbaebacqGGOaakcqWGbbqqdaWgaaWcbaGaemyAaKgabeaakiabcYcaSiqbfs5aezaafaWaaSbaaSqaaiabigdaXaqabaGccqGGPaqkaaa@3504@ . (d) The p-values ρ S (i) based on d ¯ ( A i , Δ 2 ) MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGafmizaqMbaebacqGGOaakcqWGbbqqdaWgaaWcbaGaemyAaKgabeaakiabcYcaSiqbfs5aezaafaWaaSbaaSqaaiabikdaYaqabaGccqGGPaqkaaa@3506@ . (e) The p-value ρ all (i) based on δ ^ MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGafqiTdqMbaKaaaaa@2D8A@ (A i ). (f) The average Silhouette width ω ¯ MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGafqyYdCNbaebaaaa@2DBA@ (A i ) of active clusters in A i .

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