From: Sampled ensemble neutrality as a feature to classify potential structured RNAs
 |  | 3’ Flanking | 5’ Flanking | ||
---|---|---|---|---|---|
Distance metric | Shuffle | ClustalW | Mxscarna | ClustalW | Mxscarna |
SEN | 0 | 2.06e-92 | 2.03e-92 | 4.99e-33 | 3.49e-21 |
Pearson’s CC | 0 | 1.20e-108 | 1.92e-84 | 5.07e-28 | 1.45e-23 |
Bp-distance | 1.14e-285 | 7.40e-44 | 7.40e-44 | 6.12e-19 | 3.75e-05 |
RNAmute: dot-bracket structure | 2.72e-107 | 2.15e-10 | 2.15e-10 | 8.19e-08 | 1.34e-09 |
RNAmute: Shapiro structure | 4.51e-121 | 8.07e-16 | 8.07e-16 | 2.43e-09 | 3.45e-10 |
RemuRNA | 4.68e-132 | 9.99e-01 | 9.99e-01 | 9.99e-01 | 9.99e-01 |