Table 1 Summary statistics calculated for SSR (Simple Sequence Repeat), SNP (Single Nucleotide Polymorphism) and RBIP (Retrotransposon-based insertion Polymorphism) markers
From: Genetic diversity and trait genomic prediction in a pea diversity panel
SSR | SNP | RBIP | |
|---|---|---|---|
# Monomorphic | 0 | 2 | 4 |
% Monomorphic | 0.00 | 0.01 | 0.13 |
# Polymorphic | 29 | 351 | 27 |
Mean RD | 0.80 | 0.33 | 0.17 |
% Heterogeneous accession | 1.4 | 0.83 | 1.26 |
% MAF <0.01 | 100 | 2.6 | 11 |
Mean PIC | 0.80 | 0.38 | 0.24 |
Min PIC | 0.46 | 0.01 | 0.01 |
Max PIC | 0.97 | 0.99 | 0.95 |