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Table 1 Mutator-like elements of the CitMule family

From: Involvement of a citrus meiotic recombination TTC-repeat motif in the formation of gross deletions generated by ionizing radiation and MULE activation

Element

Chr.

Frame

Pos.

Size (bp)

SNV 22 a

SNV 292 a

SNV 313 a

SNV 6757 a

SNV 6895 a

SNV6926 a

5′ TSD b

3′ TSD b

CitMule_1

3

+

6785326

6926

G

G

G

C

A

T

TTGTTGAAA

TTGTTGAAA

CitMule_2

4

+

25089221

6804

G

A

A

T

G

C

TTTTCGGTT

TTTTCGGTT

CitMule_3

4

-

25630357

6926

G

A

A

C

A

T

AACCGAAAA

AAAAATAAA

CitMule_4

4

-

14449845

6863

A

G

G

C

G

C

TTATTTTAA

TTATTTTAA

CitMule_ARR

3

-

6785296

6926

G

G

G

C

A

T

TTTTGAATT

TATGGTCTT

  1. aDiscriminatory SNVs between different CitMules.
  2. bTarget site duplication sequences.
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BMC Genomics

ISSN: 1471-2164

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