Genomic correlates of recombination rate and its variability across eight recombination maps in the western honey bee (Apis mellifera L.)

Table 1 **All significant* bivariate correlation coefficients and standardized regression coefficients (in brackets) between sequence features and local recombination rate**

Feature:	Solig nac map	Grooming map	VSH map	JH map	HBC map	LBC map	R3 map	R5 map	Average recombination rate	Variance of recombination rate
GC content	0.11 (-0.18)	0.25	0.30	0.20		0.14	0.13		0.27 (-0.29)
CpG	0.14 (0.33)	0.27 (0.15)	0.33 (0.20)	0.23 (0.36)		0.17	0.16 (0.17)	(0.07)	0.32 (0.59)
GCCGC	0.15	0.23	0.32 (0.14)	0.22		0.19 (0.31)	0.12		0.30
CCGCA	0.14	0.21	0.29	0.17 (-0.14)		0.17	0.12		0.27
CCTCCCT	0.14	0.25	0.29	0.20		0.10 (-0.13)	0.11		0.27
CCAATCA	-0.05 (-0.06)
CCCCGCAC	0.09	0.14 (0.05)	0.12	0.06		0.09			0.13
TGGGAAAGA			0.06	0.07					0.06
Microsatellites	0.08	0.13 (0.07)	0.11	0.11	0.09 (0.10)		0.11		0.14 (0.05)	(0.07)
Low complexity	-0.10	-0.23 (-0.11)	-0.23	-0.19		-0.09	-0.09		-0.24	(-0.06)
Gene number							0.14 (0.15)
Gene size							-0.10
Gene distance
Intron size							-0.10

*Significance at FDR < 0.05, FDR < 0.01 in bold for bivariate correlations; for multiple regression standard p < 0.05 is used and p < 0.01 shown in bold.

ISSN: 1471-2164