Skip to main content

Table 1 All significant* bivariate correlation coefficients and standardized regression coefficients (in brackets) between sequence features and local recombination rate

From: Genomic correlates of recombination rate and its variability across eight recombination maps in the western honey bee (Apis mellifera L.)

Feature: Solig nac map Grooming map VSH map JH map HBC map LBC map R3 map R5 map Average recombination rate Variance of recombination rate
GC content 0.11 (-0.18) 0.25 0.30 0.20   0.14 0.13   0.27 (-0.29)  
CpG 0.14 (0.33) 0.27 (0.15) 0.33 (0.20) 0.23 (0.36)   0.17 0.16 (0.17) (0.07) 0.32 (0.59)  
GCCGC 0.15 0.23 0.32 (0.14) 0.22   0.19 (0.31) 0.12   0.30  
CCGCA 0.14 0.21 0.29 0.17 (-0.14)   0.17 0.12   0.27  
CCTCCCT 0.14 0.25 0.29 0.20   0.10 (-0.13) 0.11   0.27  
CCAATCA -0.05 (-0.06)          
CCCCGCAC 0.09 0.14 (0.05) 0.12 0.06   0.09    0.13  
TGGGAAAGA    0.06 0.07      0.06  
Microsatellites 0.08 0.13 (0.07) 0.11 0.11 0.09 (0.10)   0.11   0.14 (0.05) (0.07)
Low complexity -0.10 -0.23 (-0.11) -0.23 -0.19   -0.09 -0.09   -0.24 (-0.06)
Gene number        0.14 (0.15)    
Gene size        -0.10    
Gene distance           
Intron size        -0.10    
  1. *Significance at FDR < 0.05, FDR < 0.01 in bold for bivariate correlations; for multiple regression standard p < 0.05 is used and p < 0.01 shown in bold.