Table 2 Specific transcription factor numbers in wheat identified at different developmental stages
Family | Dormant seed | Germinating seed | Reproductive | Ripening | Seedling | Vegetative | Sum of specific TF in each family | Unclear |
|---|---|---|---|---|---|---|---|---|
Alfin-like | 2 | 0 | 2 | 0 | 1 | 1 | 6 | 2 |
AP2 | 0 | 0 | 2 | 0 | 0 | 1 | 3 | 0 |
ARF | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 |
ARR-B | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
B3 | 4 | 0 | 36 | 5 | 13 | 6 | 64 | 7 |
BBR-BPC | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 |
BES1 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 1 |
bHLH | 4 | 0 | 22 | 5 | 29 | 15 | 75 | 20 |
BSD | 0 | 0 | 1 | 1 | 1 | 0 | 3 | 2 |
bZIP | 7 | 0 | 7 | 2 | 23 | 7 | 46 | 9 |
C2H2 | 0 | 0 | 11 | 2 | 4 | 4 | 21 | 8 |
C3H | 2 | 0 | 13 | 5 | 6 | 5 | 31 | 1 |
CAMTA | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 1 |
CO-like | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
CPP | 0 | 0 | 2 | 0 | 0 | 0 | 2 | 0 |
CSD | 2 | 1 | 2 | 3 | 11 | 3 | 22 | 7 |
DBB | 0 | 0 | 2 | 1 | 3 | 14 | 20 | 2 |
DBP | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Dof | 3 | 0 | 4 | 3 | 4 | 3 | 17 | 4 |
E2F/DP | 1 | 0 | 1 | 0 | 1 | 0 | 3 | 0 |
EIL | 1 | 0 | 2 | 0 | 2 | 2 | 7 | 0 |
ERF | 8 | 0 | 26 | 17 | 35 | 44 | 130 | 25 |
FAR1 | 2 | 0 | 4 | 1 | 1 | 0 | 8 | 3 |
FHA | 0 | 0 | 3 | 0 | 2 | 2 | 7 | 1 |
G2-like | 1 | 0 | 3 | 0 | 7 | 0 | 11 | 6 |
GATA | 2 | 0 | 3 | 0 | 1 | 1 | 7 | 2 |
GeBP | 0 | 0 | 2 | 0 | 1 | 0 | 3 | 0 |
GRAS | 4 | 0 | 15 | 10 | 19 | 2 | 50 | 6 |
GRF | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 |
HB-other | 5 | 2 | 12 | 9 | 9 | 9 | 46 | 9 |
HSF | 2 | 0 | 6 | 2 | 9 | 3 | 22 | 1 |
LBD(AS2/LOB) | 2 | 0 | 4 | 3 | 6 | 3 | 18 | 4 |
LIM | 2 | 0 | 4 | 1 | 6 | 2 | 15 | 2 |
LSD | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 1 |
MIKC | 0 | 0 | 14 | 0 | 2 | 2 | 18 | 3 |
mTERF | 5 | 0 | 20 | 11 | 8 | 3 | 47 | 13 |
M-type | 3 | 0 | 9 | 5 | 11 | 2 | 30 | 3 |
MYB | 2 | 0 | 18 | 8 | 15 | 24 | 67 | 14 |
MYB-related | 8 | 0 | 8 | 6 | 32 | 9 | 63 | 12 |
NAC | 1 | 0 | 16 | 15 | 33 | 40 | 105 | 16 |
NF-YA | 1 | 0 | 1 | 0 | 0 | 1 | 3 | 1 |
NF-YB | 1 | 0 | 6 | 3 | 2 | 3 | 15 | 3 |
NF-YC | 3 | 2 | 7 | 5 | 10 | 17 | 44 | 10 |
Nin-like | 1 | 0 | 1 | 0 | 4 | 0 | 6 | 0 |
OFP | 3 | 0 | 2 | 1 | 5 | 2 | 13 | 2 |
PLATZ | 1 | 0 | 1 | 3 | 2 | 3 | 10 | 1 |
RAV | 0 | 0 | 0 | 0 | 2 | 1 | 3 | 1 |
S1Fa-like | 0 | 0 | 1 | 2 | 4 | 0 | 7 | 1 |
SBP | 0 | 0 | 6 | 0 | 1 | 0 | 7 | 3 |
sigma70-like | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 0 |
SRS | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
TALE | 0 | 0 | 2 | 0 | 0 | 1 | 3 | 0 |
TAZ | 2 | 0 | 1 | 0 | 3 | 0 | 6 | 0 |
TCP | 0 | 0 | 2 | 0 | 0 | 1 | 3 | 0 |
Tify | 0 | 0 | 12 | 1 | 10 | 13 | 36 | 4 |
Trihelix | 3 | 0 | 4 | 3 | 3 | 2 | 15 | 1 |
TUB | 0 | 1 | 1 | 1 | 9 | 2 | 14 | 3 |
ULT | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
VOZ | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 1 |
Whirly | 1 | 0 | 0 | 0 | 2 | 0 | 3 | 2 |
WRKY | 7 | 0 | 13 | 4 | 28 | 23 | 75 | 11 |
YABBY | 0 | 0 | 2 | 2 | 0 | 0 | 4 | 1 |
ZF-HD | 2 | 0 | 4 | 0 | 1 | 1 | 8 | 2 |
Sum of specific TFs at different stage | 100 | 6 | 342 | 141 | 390 | 278 | 1257 | 234 |
Percentage of specific TFs at different stage | 4.15% | 0.25% | 14.21% | 5.86% | 16.20% | 11.55% | 52.22% | 9.72% |