Table 3 Numbers of tissue specific transcription factor in wheat
Family | Crown | Flower | Leaf | Root | Seed | Stem | Sum of specific TF in each family | Other tissue |
|---|---|---|---|---|---|---|---|---|
Alfin-like | 0 | 3 | 2 | 1 | 3 | 0 | 9 | 1 |
AP2 | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 0 |
ARF | 0 | 3 | 0 | 0 | 0 | 0 | 3 | 0 |
ARR-B | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
B3 | 1 | 40 | 5 | 7 | 11 | 0 | 64 | 12 |
BBR-BPC | 0 | 1 | 0 | 0 | 1 | 1 | 3 | 0 |
BES1 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 0 |
bHLH | 3 | 18 | 13 | 25 | 9 | 5 | 73 | 23 |
BSD | 0 | 0 | 0 | 2 | 1 | 0 | 3 | 1 |
bZIP | 0 | 7 | 3 | 17 | 11 | 3 | 41 | 13 |
C2H2 | 0 | 10 | 1 | 8 | 4 | 0 | 23 | 8 |
C3H | 0 | 10 | 1 | 1 | 8 | 1 | 21 | 9 |
CAMTA | 0 | 0 | 0 | 1 | 0 | 1 | 2 | 1 |
CO-like | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
CPP | 0 | 3 | 0 | 0 | 1 | 0 | 4 | 0 |
CSD | 0 | 3 | 3 | 11 | 5 | 0 | 22 | 6 |
DBB | 0 | 1 | 7 | 2 | 1 | 0 | 11 | 13 |
DBP | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Dof | 0 | 4 | 4 | 2 | 7 | 1 | 18 | 4 |
E2F/DP | 0 | 1 | 1 | 0 | 1 | 0 | 3 | 1 |
EIL | 0 | 1 | 2 | 0 | 2 | 0 | 5 | 2 |
ERF | 1 | 23 | 12 | 24 | 23 | 1 | 84 | 64 |
FAR1 | 0 | 5 | 0 | 1 | 2 | 1 | 9 | 3 |
FHA | 0 | 4 | 1 | 1 | 0 | 0 | 6 | 2 |
G2-like | 1 | 3 | 3 | 3 | 2 | 3 | 15 | 4 |
GATA | 0 | 2 | 0 | 2 | 5 | 0 | 9 | 2 |
GeBP | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 |
GRAS | 1 | 9 | 10 | 6 | 14 | 0 | 40 | 7 |
GRF | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 |
HB-other | 0 | 10 | 4 | 6 | 19 | 2 | 41 | 15 |
HSF | 0 | 8 | 2 | 2 | 7 | 0 | 19 | 11 |
LBD(AS2/LOB) | 1 | 5 | 1 | 5 | 4 | 0 | 16 | 5 |
LIM | 0 | 4 | 2 | 5 | 2 | 0 | 13 | 3 |
LSD | 0 | 0 | 2 | 0 | 0 | 0 | 2 | 2 |
MIKC | 1 | 12 | 0 | 2 | 2 | 1 | 18 | 5 |
mTERF | 2 | 21 | 2 | 7 | 12 | 5 | 49 | 8 |
M-type | 0 | 9 | 3 | 1 | 5 | 1 | 19 | 9 |
MYB | 0 | 23 | 5 | 17 | 13 | 4 | 62 | 24 |
MYB-related | 0 | 8 | 16 | 17 | 11 | 2 | 54 | 20 |
NAC | 1 | 15 | 29 | 15 | 27 | 2 | 89 | 51 |
NF-YA | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 1 |
NF-YB | 0 | 3 | 2 | 2 | 6 | 1 | 14 | 3 |
NF-YC | 1 | 10 | 3 | 11 | 13 | 0 | 38 | 19 |
Nin-like | 0 | 0 | 0 | 3 | 1 | 0 | 4 | 1 |
OFP | 0 | 2 | 2 | 5 | 3 | 0 | 12 | 2 |
PLATZ | 0 | 0 | 0 | 3 | 4 | 0 | 7 | 3 |
RAV | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 3 |
S1Fa-like | 0 | 1 | 0 | 3 | 1 | 0 | 5 | 0 |
SBP | 1 | 4 | 0 | 0 | 1 | 1 | 7 | 2 |
sigma70-like | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 |
SRS | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 |
TALE | 0 | 2 | 0 | 1 | 0 | 0 | 3 | 0 |
TAZ | 0 | 1 | 1 | 1 | 1 | 0 | 4 | 0 |
TCP | 0 | 1 | 0 | 0 | 1 | 0 | 2 | 0 |
Tify | 1 | 13 | 10 | 9 | 3 | 2 | 38 | 14 |
Trihelix | 0 | 4 | 3 | 1 | 7 | 0 | 15 | 2 |
TUB | 0 | 3 | 3 | 4 | 1 | 1 | 12 | 6 |
ULT | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
VOZ | 0 | 0 | 2 | 1 | 0 | 0 | 3 | 0 |
Whirly | 1 | 0 | 1 | 0 | 1 | 0 | 3 | 0 |
WRKY | 2 | 19 | 10 | 21 | 7 | 3 | 62 | 27 |
YABBY | 0 | 3 | 0 | 0 | 2 | 0 | 5 | 1 |
ZF-HD | 0 | 3 | 3 | 0 | 2 | 0 | 8 | 2 |
Sum of specific TFs in different tissue | 18 | 338 | 175 | 262 | 269 | 42 | 1104 | 416 |
Percentage of tissue specific TFs | 0.75% | 14.04% | 7.27% | 10.88% | 11.18% | 1.74% | 45.87% | 17.28% |