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Table 3 Numbers of tissue specific transcription factor in wheat

From: Genome-wide characterization of developmental stage- and tissue-specific transcription factors in wheat

Family Crown Flower Leaf Root Seed Stem Sum of specific TF in each family Other tissue
Alfin-like 0 3 2 1 3 0 9 1
AP2 0 0 0 1 1 0 2 0
ARF 0 3 0 0 0 0 3 0
ARR-B 0 0 0 0 0 0 0 0
B3 1 40 5 7 11 0 64 12
BBR-BPC 0 1 0 0 1 1 3 0
BES1 0 0 0 2 0 0 2 0
bHLH 3 18 13 25 9 5 73 23
BSD 0 0 0 2 1 0 3 1
bZIP 0 7 3 17 11 3 41 13
C2H2 0 10 1 8 4 0 23 8
C3H 0 10 1 1 8 1 21 9
CAMTA 0 0 0 1 0 1 2 1
CO-like 0 0 0 0 0 0 0 0
CPP 0 3 0 0 1 0 4 0
CSD 0 3 3 11 5 0 22 6
DBB 0 1 7 2 1 0 11 13
DBP 0 0 0 0 0 0 0 0
Dof 0 4 4 2 7 1 18 4
E2F/DP 0 1 1 0 1 0 3 1
EIL 0 1 2 0 2 0 5 2
ERF 1 23 12 24 23 1 84 64
FAR1 0 5 0 1 2 1 9 3
FHA 0 4 1 1 0 0 6 2
G2-like 1 3 3 3 2 3 15 4
GATA 0 2 0 2 5 0 9 2
GeBP 0 2 0 0 0 0 2 0
GRAS 1 9 10 6 14 0 40 7
GRF 0 1 0 0 0 0 1 1
HB-other 0 10 4 6 19 2 41 15
HSF 0 8 2 2 7 0 19 11
LBD(AS2/LOB) 1 5 1 5 4 0 16 5
LIM 0 4 2 5 2 0 13 3
LSD 0 0 2 0 0 0 2 2
MIKC 1 12 0 2 2 1 18 5
mTERF 2 21 2 7 12 5 49 8
M-type 0 9 3 1 5 1 19 9
MYB 0 23 5 17 13 4 62 24
MYB-related 0 8 16 17 11 2 54 20
NAC 1 15 29 15 27 2 89 51
NF-YA 0 0 0 1 1 0 2 1
NF-YB 0 3 2 2 6 1 14 3
NF-YC 1 10 3 11 13 0 38 19
Nin-like 0 0 0 3 1 0 4 1
OFP 0 2 2 5 3 0 12 2
PLATZ 0 0 0 3 4 0 7 3
RAV 0 0 0 1 0 0 1 3
S1Fa-like 0 1 0 3 1 0 5 0
SBP 1 4 0 0 1 1 7 2
sigma70-like 0 0 1 0 0 0 1 0
SRS 0 0 0 1 0 0 1 0
TALE 0 2 0 1 0 0 3 0
TAZ 0 1 1 1 1 0 4 0
TCP 0 1 0 0 1 0 2 0
Tify 1 13 10 9 3 2 38 14
Trihelix 0 4 3 1 7 0 15 2
TUB 0 3 3 4 1 1 12 6
ULT 0 0 0 0 0 0 0 0
VOZ 0 0 2 1 0 0 3 0
Whirly 1 0 1 0 1 0 3 0
WRKY 2 19 10 21 7 3 62 27
YABBY 0 3 0 0 2 0 5 1
ZF-HD 0 3 3 0 2 0 8 2
Sum of specific TFs in different tissue 18 338 175 262 269 42 1104 416
Percentage of tissue specific TFs 0.75% 14.04% 7.27% 10.88% 11.18% 1.74% 45.87% 17.28%
  1. “Specify TF number of every family” is the sum of the TF numbers from the crown, flower, leaf, root, seed, and stem.
  2. Percentage of tissue specific TFs was obtained by dividing the number of specific TFs from different tissues by 2407.