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Table 1 Parameters: Values used for the different parameters tested

From: Algorithms for differential splicing detection using exon arrays: a comparative assessment

 

Parameters

ANOVA result

    
 

Short

Value 1

Value 2

ARH

SI

KLA

MAD

MID

ANO

PAC

SCO

Samples per group

snum

15 vs. 5

15 vs. 15

+

+

+

-

+

+

-

-

Exons per gene

enum

10

30 enum

-

-

-

-

-

+

-

+

Expression intensity

expr

high

low expr

+

+

+

+

+

+

-

+

Percent DS samples per group

pcnt

60%

100% pcnt

+

+

+

+

+

+

-

+

  1. The combination of 4 parameters with two possible values leads to 16 scenarios. ANOVA Results: Analysis of variance reveals the influence of parameters on accuracy. ‘+’ indicates a significant influence of the parameter on accuracy, ‘-’ means no significant influence. For computational aspects see Additional file 1: Section “Significance of parameter influence”.