Skip to main content

Table 2 Comparisons of the expression levels of representative hormone genes involved in rice innate immunity between the rice introgression line H471 carrying Xa39 and the recurrent parent Huang-Hua-Zhan (HHZ)

From: Comparative transcriptome profiling of a rice line carrying Xa39 and its parents triggered by Xanthomonas oryzae pv. oryzae provides novel insights into the broad-spectrum hypersensitive response

Gene ID Gene symbol Note H471- CK vs HHZ- CK H471- 1dpi vs HHZ- 1dpi H471-2dpi vs HHZ-2dpi H471- 1dpi vs H471- CK H471- 2dpi vs H471- CK
log2( FC) Up/Down log2 (FC) Up/Down log2( FC) Up/Down log2 (FC) Up/Down log2 (FC) Up/Down
LOC_Os01g09800 NH1 SA pathway related gene 0.03 -- −0.30 -- −0.02 -- −0.90 down −0.35 --
LOC_Os07g48820 TGA2.1/OsbZIP63 SA pathway related gene 0.12 -- 0.12 -- 0.01 -- 0.01 -- 0.16 --
LOC_Os05g49140 OsMPK7 JA responsive gene −0.22 -- −0.02 -- 0.11 -- 1.48 up 1.65 up
LOC_Os08g39850 LOX2 JA biosynthesis −0.24 -- −0.42 -- −0.14 -- −0.86 down −0.64 --
LOC_Os01g60020 -- ABA/JA related gene 1.49 up −0.21 -- 0.29 -- −4.24 down −3.72 down
LOC_Os02g43790 -- JA/Ethylene related gene 0.78 up −0.28 -- 0.13 -- −3.54 down −3.37 down
LOC_Os05g48870 ARF5 Ethylene related gene 0.34 -- −0.13 -- 0.09 -- 1.28 up 0.70 --
LOC_Os07g44890 GID1L2 GA receptor 0.91 -- 2.08 up 2.73 up 1.22 -- 1.48 up
LOC_Os08g07760 OsSERK1 BR Signaling 0.34 -- 1.28 up 0.99 up 0.68 -- 0.53 --
LOC_Os03g40540 -- BR biosynthesis 0.19 -- 1.18 up 0.60 -- 1.83 up 0.99 up