Table 2 Comparisons of the expression levels of representative hormone genes involved in rice innate immunity between the rice introgression line H471 carrying Xa39 and the recurrent parent Huang-Hua-Zhan (HHZ)
Gene ID | Gene symbol | Note | H471- CK vs HHZ- CK | H471- 1dpi vs HHZ- 1dpi | H471-2dpi vs HHZ-2dpi | H471- 1dpi vs H471- CK | H471- 2dpi vs H471- CK | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
log2( FC) | Up/Down | log2 (FC) | Up/Down | log2( FC) | Up/Down | log2 (FC) | Up/Down | log2 (FC) | Up/Down | |||
LOC_Os01g09800 | NH1 | SA pathway related gene | 0.03 | -- | −0.30 | -- | −0.02 | -- | −0.90 | down | −0.35 | -- |
LOC_Os07g48820 | TGA2.1/OsbZIP63 | SA pathway related gene | 0.12 | -- | 0.12 | -- | 0.01 | -- | 0.01 | -- | 0.16 | -- |
LOC_Os05g49140 | OsMPK7 | JA responsive gene | −0.22 | -- | −0.02 | -- | 0.11 | -- | 1.48 | up | 1.65 | up |
LOC_Os08g39850 | LOX2 | JA biosynthesis | −0.24 | -- | −0.42 | -- | −0.14 | -- | −0.86 | down | −0.64 | -- |
LOC_Os01g60020 | -- | ABA/JA related gene | 1.49 | up | −0.21 | -- | 0.29 | -- | −4.24 | down | −3.72 | down |
LOC_Os02g43790 | -- | JA/Ethylene related gene | 0.78 | up | −0.28 | -- | 0.13 | -- | −3.54 | down | −3.37 | down |
LOC_Os05g48870 | ARF5 | Ethylene related gene | 0.34 | -- | −0.13 | -- | 0.09 | -- | 1.28 | up | 0.70 | -- |
LOC_Os07g44890 | GID1L2 | GA receptor | 0.91 | -- | 2.08 | up | 2.73 | up | 1.22 | -- | 1.48 | up |
LOC_Os08g07760 | OsSERK1 | BR Signaling | 0.34 | -- | 1.28 | up | 0.99 | up | 0.68 | -- | 0.53 | -- |
LOC_Os03g40540 | -- | BR biosynthesis | 0.19 | -- | 1.18 | up | 0.60 | -- | 1.83 | up | 0.99 | up |