Table 1 Summary statistics of the consensus INDEL call set from the exomes of the 1000 Genomes Project
From: The distribution and mutagenesis of short coding INDELs from 1,128 whole exomes
| Â | Continental group | Total merged | |||
|---|---|---|---|---|---|
| Â | Africa | Americas | Asia | Europe | Â |
# Samples | 250 | 199 | 293 | 386 | 1128 |
# INDEL loci | 2689 | 2057 | 2334 | 2555 | 7210 |
% Novel (not in low coverage) | 78.0 | 71.5 | 84.7 | 81.6 | 90.03 |
% Rare (AAF < 1%) | 68.1 | 71.3 | 78.3 | 79.3 | 96.7 |
# INDELs per exome | 173 | 146 | 133 | 142 | 147 |
% frameshift INDELs per exome | 44.1 | 40.3 | 40.1 | 41.9 | 41.7 |