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Table 1 Taxonomy of fungal genomes, source and lifestyle

From: Whole genome comparative analysis of transposable elements provides new insight into mechanisms of their inactivation in fungal genomes

Fungi kingdom

Strain

Abrev.

Phylum

Class Family

NCBI BioProject

% TE

Assembly size

Lifestyle

Botrytis cinerea T4

T4

BcinT4

Ascomycota

Leotiomycetes Sclerotiniaceae

64593

0.7

39.5Ā Mb

Necrotrophic pathogen

Botrytis cinerea 05.10

05.10

Bcin0510

Leotiomycetes Sclerotiniaceae

20061

2.2

38.8Ā Mb

Necrotrophic pathogen

Sclerotinia sclerotiorum

1980 UF-70

Sscl

Leotiomycetes Sclerotiniaceae

20263

9.5

38.2Ā Mb

Necrotrophic pathogen

Blumeria graminis f. sp. hordeĆÆ

DH14

Bgra

Leotiomycetes Erysiphaceae

28821

76.4

120Ā Mb

Obligate biotrophic pathogen

Magnaporthe oryzae

7015

Mory

Sordariomycetes Magnaporthaceae

1433

11.1

40.9Ā Mb

Hemibiotrophic pathogen

Leptosphaeria maculans

JN3

Lmac

Dothideomycetes

63129

33.3

44.9Ā Mb

Hemibiotrophic pathogen

Tuber melanosporum

Mel28

Tmel

Pezizomycetes Leptosphaeriaceae

49017

60.1

123.6Ā Mb

Symbiotic

Melampsora larici-populina

98AG31

Mlar

Basidiomycota

Pucciniomycetes Melampsoraceae

46711

51.7

101.1Ā Mb

Obligate biotrophic pathogen

Puccinia graminis f. sp. tritici

CRL 75-36-700-3

Pgra

Pucciniomycetes Pucciniaceae

66375

46.4

81.6Ā Mb

Obligate biotrophic pathogen

Microbotryum violaceum

P1A1 Lamole

Mvio

Pucciniomycetes Mycrobotryaceae

41281

14.1

25.2Ā Mb

Obligate biotrophic pathogen