Table 3 Evaluations with RNA-Seq dataset at gene level
From: GASS: genome structural annotation for Eukaryotes based on species similarity
Data source | # of annotated genes | # of mapped gene | ||||
|---|---|---|---|---|---|---|
Ensembl-rheMac2 | GASS | RefSeq-rheMac3 | Ensembl-rheMac2 | GASS | RefSeq-rheMac3 | |
SRR299127 | 10,096 | 10,096 | 6,274 | 5,335(52.85%) | 5,979(59.22%) | 3,714(59.19%) |
SRR832953 | 9,379(92.90%) | 9,496(94.05%) | 5,703(90.89%) | |||
SRR594464 | 8,305(82.27%) | 8,376(82.96%) | 5.265(83.92%) | |||