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Table 3 Most abundant transcripts in E. senticosus leaf transcriptome

From: Transcriptomic analysis of Siberian ginseng (Eleutherococcus senticosus) to discover genes involved in saponin biosynthesis

Contig ID

Length (bp)

Read

Target accession no.

Target description

EPT001TT0600C012714

253

7284

KC844054

Chloroplast, complete genome [Aconitum barbatum]

EPT001TT0600C012563

263

7080

KF856619

Chloroplast, complete genome [Cercis canadensis]

EPT001TT0600C015018

111

5674

CAA42617

Ribulose bisphosphate carboxylase [Phaseolus vulgaris]

EPT001TT0600C012209

292

4515

CAN59721

Hypothetical protein VITISV_032350 [Vitis vinifera]

EPT001TT0600C000003

5621

3273

XP_003621695

ATP synthase subunit beta [Medicago truncatula]

EPT001TT0600C013281

215

3222

ZP_06388631

Hypothetical protein Ssol98_08391 [Sulfolobus solfataricus]

EPT001TT0600C012224

291

3026

AFO67221

Putative chlorophyll a/b binding protein, partial [Aralia elata]

EPT001TT0600C012058

305

2893

BAE46384

Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Panax ginseng]

EPT001TT0600C014082

163

2852

XP_003637074

Cell wall-associated hydrolase, partial [Medicago truncatula]

EPT001TT0600C014525

137

2717

XP_003544026

PREDICTED: uncharacterised protein LOC100801029 [Glycine max]

EPT001TT0600C008793

616

2650

CAA48410

Light harvesting chlorophyll a /b binding protein [Hedera helix]

EPT001TT0600C013420

206

2624

BAE46384

Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Panax ginseng]

EPT001TT0600C013790

181

2602

BAD26579

Cytochrome P450-like TBP [Citrullus lanatus]

EPT001TT0600C011532

359

2376

AFO67218

Putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Aralia elata]

EPT001TT0600C014447

141

2347

XP_003064992

Senescence-associated protein [Micromonas pusilla]

EPT001TT0600C010797

426

2319

 

No hit

EPT001TT0600C001408

1540

2219

XP_003588355

Mitochondrial protein, putative [Medicago truncatula]

EPT001TT0600C011162

393

2219

XP_003637074

Cell wall-associated hydrolase, partial [Medicago truncatula]

EPT001TT0600C015121

106

2045

ZP_04821298

Conserved hypothetical protein [Clostridium botulinum]