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Table 1 Isolate overview

From: Genomic factors related to tissue tropism in Chlamydia pneumoniae infection

Isolate Tissue type Isolation source Continent Country Year of isolation Source Accession
CWL029 respiratory throat Northamerica USA (Atlanta) before 1987 NCBI GenBank NC_000922.1
AR39 respiratory pharynx Northamerica USA (Seattle) 1983 NCBI GenBank NC_002179.2
J138 respiratory pharynx Asia Japan 1994 NCBI GenBank NC_002491.1
TW183 conjunctival conjunctiva Asia Taiwan 1965 NCBI GenBank NC_005043.1
LPCoLN respiratory nasal swab (koala) Australia Australia NA NCBI GenBank NC_017285.1
CM1 respiratory sputum Northamerica USA (Atlanta) 1991 Black/ATCC ERS640705
CV14 vascular coronary artery Europe Germany (Mainz) 2002 Maass ERS640706
CV15 vascular coronary artery Europe Germany (Mainz) 2002 Maass ERS640707
CWL011 respiratory throat Northamerica USA (Atlanta) 1987/1988 Black/CDC ERS640708
CWL029c respiratory throat Northamerica USA (Atlanta) 1991 Black/ATCC ERS640709
DC9 NA liver (frog) Africa Central African Republic NA Sachse ERS640710
GiD respiratory respiratory tract Europe Germany (Gießen) before 1997 Hegemann ERS640711
H12 respiratory respiratory tract Europe Finland 1991 Saikku ERS640712
K7 respiratory respiratory tract Europe Finland 1987 Saikku ERS640713
MUL2216 respiratory bronchoalveolar lavage Europe Germany (Lübeck) 2001 Maass ERS640714
Panola respiratory respiratory tract Europe Finland NA Saikku ERS640715
PB1 vascular PBMC Europe Germany (Lübeck) 1997 Maass ERS640716
PB2 vascular PBMC Europe Germany (Lübeck) 1998 Maass ERS640717
U1271 respiratory respiratory tract Europe Sweden (Umea) NA Boman ERS640718
UZG1 respiratory respiratory tract Europe Belgium before 1996 Ossewaarde/CDC ERS640719
Wien1 vascular carotid artery Europe Austria (Vienna) 1998- 1999 Apfalter ERS640720
Wien2 vascular femoral artery Europe Austria (Vienna) 1998- 1999 Apfalter ERS640721
Wien3 vascular infrarenal artery Europe Austria (Vienna) 1998- 1999 Apfalter ERS640722
YK41 respiratory nasopharynx Asia Japan (Hiroshima) before 1992 Kanomoto/CDC ERS640723
  1. Origin of all isolates used in the study. The genomes for the first five isolates are publicly available, genomes of all other isolates were newly sequenced in this study (study accession number: PRJEB8246); sample accessions are given for all newly sequenced genomes; NA: not available.