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Table 4 Tissue-specific SNPs

From: Genomic factors related to tissue tropism in Chlamydia pneumoniae infection

Position Locus_tag Description Clinical isolates from the respiratory tract Clinical isolates from blood monocytes and artery vessels Clinical isolate from conjunctiva
    CM1 CWL011 CWL029 GiD H12 K7 MUL2216 U1271 UZG1 YK41 J138 AR39 Panola CWL029c CV14 CV15 PB1 PB2 Wien1 Wien2 Wien3 TW183
95,992 CPn_0081 RNA Polymerase Beta G G G G G G G G G G G G G G T G T T T G G G
326,721 CPn_0289 Neutral Amino Acid (Glutamate) Transporter G G G G G G T G G G G G G G T T T T T T T G
329,607 CPn_0292 Inclusion Membrane Protein C G G G G G G T G G G G G G G T T T T T T T G
576,846 CPn_0496 CT391 hypothetical protein C C C C C C A C C C C C C C A A A A A A A C
733,006 CPn_0650 Acyl-Carrier UDP-GlcNAc O-Acyltransferase C C C C C C C C C C C C C C G G G G G C C C
800,395 CPn_0714 Glutamyl tRNA Reductase G G G G G G G G G G G G G G T T G T T T T G
896,637 CPn_0793 sigma regulatory family protein - PP2C phosphatase (RsbW antagonist) G G G G G G T G G G G G G G T T T G T T T G
1,050,652 CPn_0920 Sulfite Synthesis/biphosphate phosphatase C C C C C C C C C C C C C C A A A A A C C C
1,156,117 CPn_1006 CT849 hypothetical protein T T T T T T C T T T T T T T C C C C C C C T
  1. SNP loci that distinguish respiratory and vascular isolates with the corresponding genes in CWL029 and their genotype in the different isolates. All SNPs are non-synonymous.