From: Global gene expression patterns of grass carp following compensatory growth
Sampling conditions | Group | Tissue | Sample name | Duplicates | Raw reads | Clean reads | Q20 | Â | Â |
---|---|---|---|---|---|---|---|---|---|
(%) | Total | Â | Â | Â | Â | Â | Â | Â | Â |
mapped | Â | Â | Â | Â | Â | Â | Â | Â | Â |
reads | Uniquely | Â | Â | Â | Â | Â | Â | Â | Â |
mapped | Â | Â | Â | Â | Â | Â | Â | Â | Â |
reads | Â | Â | Â | Â | Â | Â | Â | Â | Â |
After | Â | Â | Â | Â | Â | Â | Â | Â | Â |
fasting | control group | muscle | C-1-M | a | 15314862 | 15128756 | 97.33 | 14059595 (92.93%) | 13217716 (87.37%) |
 |  |  |  | b | 14823783 | 14646957 | 97.41 | 13619629 (92.99%) | 12843759 (87.69%) |
 |  |  |  | c | 16321214 | 16109369 | 97.33 | 14958284 (92.85%) | 14160730 |
(87.9%) | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 |  | liver | C-1-L | a | 14438249 | 14251753 | 96.49 | 13182134 (92.49%) | 12514167 (87.81%) |
 |  |  |  | b | 17127547 | 16903996 | 96.56 | 15592380 (92.24%) | 14753416 (87.28%) |
 |  |  |  | c | 14523380 | 14310106 | 96.5 | 13233306 (92.48%) | 12636047 |
(88.3%) | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 | experimental group | muscle | E-1-M | a | 14988606 | 14778249 | 96.82 | 13616046 (92.14%) | 13093152 |
(88.6%) | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 |  |  |  | b | 17791102 | 17541598 | 96.93 | 16214273 (92.43%) | 15661812 (89.28%) |
 |  |  |  | c | 14762762 | 14589546 | 96.98 | 13498507 (92.52%) | 12890714 (88.36%) |
 |  | liver | E-1-L | a | 16289196 | 16107092 | 97.55 | 14933900 (92.72%) | 14405289 (89.43%) |
 |  |  |  | b | 11491146 | 11345300 | 97.52 | 10536721 (92.87%) | 10183044 (89.76%) |
 |  |  |  | c | 17191329 | 16972319 | 97.38 | 15807590 (93.14%) | 15308206 |
(90.2%) | Â | Â | Â | Â | Â | Â | Â | Â | Â |
After re-feeding | control group | muscle | C-2-M | a | 19323422 | 18945419 | 97.6 | 17275859 (91.19%) | 16426146 |
(86.7%) | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 |  |  |  | b | 17903385 | 17565549 | 97.62 | 15988557 (91.02%) | 15240472 (86.76%) |
 |  |  |  | c | 21096997 | 20647765 | 97.63 | 18828972 (91.19%) | 17985183 |
(87.1%) | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 |  | liver | C-2-L | a | 17502755 | 17349119 | 97.56 | 16078785 (92.68%) | 15316916 (88.29%) |
 |  |  |  | b | 17230237 | 17050272 | 97.52 | 15895193 (93.23%) | 15188285 (89.08%) |
 |  |  |  | c | 16617660 | 16399951 | 97.5 | 15177704 (92.55%) | 14472205 (88.25%) |
 | experimental group | muscle | E-2-M | a | 12796800 | 12303323 | 95.99 | 11089012 (90.13%) | 10562927 (85.85%) |
 |  |  |  | b | 20644903 | 19733726 | 95.82 | 17856999 (90.49%) | 17012127 (86.21%) |
 |  |  |  | c | 16427709 | 15639982 | 95.88 | 14047696 (89.82%) | 13295885 (85.01%) |
 |  | liver | E-2-L | a | 13892743 | 13713405 | 97.42 | 12794265 (93.3%) | 12273895 |
(89.5%) | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 |  |  |  | b | 17895233 | 17661014 | 97.42 | 16454496 (93.17%) | 15843241 (89.71%) |
 |  |  |  | c | 15687125 | 15496141 | 97.43 | 14440618 (93.19%) | 13845040 (89.35%) |