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Table 1 Summary of sequencing data and mapped results in the study

From: Global gene expression patterns of grass carp following compensatory growth

Sampling conditions Group Tissue Sample name Duplicates Raw reads Clean reads Q20   
(%) Total         
mapped          
reads Uniquely         
mapped          
reads          
After          
fasting control group muscle C-1-M a 15314862 15128756 97.33 14059595 (92.93%) 13217716 (87.37%)
     b 14823783 14646957 97.41 13619629 (92.99%) 12843759 (87.69%)
     c 16321214 16109369 97.33 14958284 (92.85%) 14160730
(87.9%)          
   liver C-1-L a 14438249 14251753 96.49 13182134 (92.49%) 12514167 (87.81%)
     b 17127547 16903996 96.56 15592380 (92.24%) 14753416 (87.28%)
     c 14523380 14310106 96.5 13233306 (92.48%) 12636047
(88.3%)          
  experimental group muscle E-1-M a 14988606 14778249 96.82 13616046 (92.14%) 13093152
(88.6%)          
     b 17791102 17541598 96.93 16214273 (92.43%) 15661812 (89.28%)
     c 14762762 14589546 96.98 13498507 (92.52%) 12890714 (88.36%)
   liver E-1-L a 16289196 16107092 97.55 14933900 (92.72%) 14405289 (89.43%)
     b 11491146 11345300 97.52 10536721 (92.87%) 10183044 (89.76%)
     c 17191329 16972319 97.38 15807590 (93.14%) 15308206
(90.2%)          
After re-feeding control group muscle C-2-M a 19323422 18945419 97.6 17275859 (91.19%) 16426146
(86.7%)          
     b 17903385 17565549 97.62 15988557 (91.02%) 15240472 (86.76%)
     c 21096997 20647765 97.63 18828972 (91.19%) 17985183
(87.1%)          
   liver C-2-L a 17502755 17349119 97.56 16078785 (92.68%) 15316916 (88.29%)
     b 17230237 17050272 97.52 15895193 (93.23%) 15188285 (89.08%)
     c 16617660 16399951 97.5 15177704 (92.55%) 14472205 (88.25%)
  experimental group muscle E-2-M a 12796800 12303323 95.99 11089012 (90.13%) 10562927 (85.85%)
     b 20644903 19733726 95.82 17856999 (90.49%) 17012127 (86.21%)
     c 16427709 15639982 95.88 14047696 (89.82%) 13295885 (85.01%)
   liver E-2-L a 13892743 13713405 97.42 12794265 (93.3%) 12273895
(89.5%)          
     b 17895233 17661014 97.42 16454496 (93.17%) 15843241 (89.71%)
     c 15687125 15496141 97.43 14440618 (93.19%) 13845040 (89.35%)