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Table 4 Defense-genes up- and down-regulated in sweet orange in response to CHI-treatment ( P< 0.01)

From: Transcriptional profile of sweet orange in response to chitosan and salicylic acid

CHI
Gene ID Gene name/function RNA-seq qRT-PCR
AT5G60450 ARF4/auxin response factor 4 −227.07** NA
AT3G12500 HCHIB/basic chitinase −226.22 NA
AT5G62000 ARF2/auxin response factor 2 −182.94 −1.81
AT3G61415 EBF1 - protein binding/ubiquitin-protein ligase −134,34 −1,36
AT2G25490 SK21/SKP1-like 21-SCF ubiquitin ligase complex −135.59 −2.56
AT5G17420 Cellulose synthase −160.14 −1.67
AT2G02560 CAND1/cullin-associated and neddylation dissociated −198.86 NA
AT5G49330 MYB111/myb domain protein 111 175.1 NA
AT3G50740 UDP-glucosyltransferase 72 E1 158.32 NA
AT3G11480 BSMT1/S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 158.09 NA
AT4G13400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 153.90 1.31
AT4G34050 CCoAOMT1/S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 111.50 NA
AT2G28190 CSD2/copper/zinc superoxide dismutase 2 104.85 1.30
  1. r = 0.96.
  2. not assessed.
  3. ** = Important genes modulated by chitosan based on the transcript profiling and considering the study of Povero et al. [24].