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Table 3 GO terms enriched in the distinct gene sets of all three Chinese wild Vitis

From: Transcriptome characterization of three wild Chinese Vitis uncovers a large number of distinct disease related genes

GO ID

GO term

GO term level

BH

HN

S

C*

B

Corrected P-value

C

B

Corrected P-value

C

B

Corrected P-value

GO:0050896

response to stimulus

2

47%

35%

3.73E-13

50%

35%

8.09E-26

51%

35%

1.08E-27

GO:0006950

response to stress

3

38%

24%

1.65E-22

42%

24%

2.41E-45

41%

24%

9.38E-39

GO:0006952

defense response

4

26%

11%

4.26E-37

31%

12%

2.01E-78

31%

12%

2.34E-75

GO:0098542

defense response to other organism

4

11%

7%

2.01E-02

13%

7%

2.54E-09

14%

7%

3.21E-14

GO:0009617

response to bacterium

4

9%

5%

1.11E-03

10%

5%

5.25E-07

11%

6%

8.50E-11

GO:0045087

innate immune response

4

8%

4%

5.56E-04

8%

4%

4.34E-07

9%

4%

6.53E-11

GO:0006955

immune response

3

8%

4%

3.59E-03

8%

5%

7.25E-07

9%

5%

1.87E-10

GO:0042742

defense response to bacterium

6

8%

4%

5.15E-03

9%

5%

5.20E-09

10%

5%

4.03E-12

GO:0009814

defense response, incompatible interaction

5

4%

2%

9.50E-03

4%

2%

2.86E-04

4%

2%

7.07E-05

GO:0009816

defense response to bacterium, incompatible interaction

6

3%

1%

5.15E-04

3%

1%

3.91E-05

3%

1%

1.36E-05

GO:0009626

plant-type hypersensitive response

5

2%

1%

4.62E-02

3%

1%

8.40E-07

3%

1%

3.87E-06

GO:0098581

detection of external biotic stimulus

5

1%

0%

2.98E-02

1%

0%

1.03E-02

2%

0%

4.12E-11

GO:0009804

coumarin metabolic process

6

2%

0%

1.31E-03

2%

0%

1.84E-08

1%

0%

2.91E-03

GO:0009805

coumarin biosynthetic process

6

2%

0%

1.31E-03

2%

0%

1.84E-08

1%

0%

2.91E-03

GO:0015074

DNA integration

6

3%

0%

5.21E-23

2%

0%

5.65E-10

3%

0%

3.69E-15

GO:0015916

fatty-acyl-CoA transport

7

1%

0%

7.87E-08

0%

0%

3.88E-05

0%

0%

1.12E-03

GO:1901337

thioester transport

4

1%

0%

7.87E-08

0%

0%

3.88E-05

0%

0%

1.12E-03

GO:0080001

mucilage extrusion from seed coat

5

1%

0%

1.08E-05

1%

0%

2.57E-03

1%

0%

4.89E-03

GO:0009835

fruit ripening

5

1%

0%

4.40E-03

1%

0%

1.33E-05

1%

0%

1.52E-04

  1. BH, V. pseudoreticulata accession “Baihe-13-1”; HN, V. pseudoreticulata accession “Hunan-1”; S, V. quinquangularis accession “Shang-24”.
  2. *C: frequency of distinct genes belonging to the corresponding GO terms; B: frequency of all transcripts in each wild Vitis species belonging to the corresponding GO terms.