Skip to main content

Table 3 GO terms enriched in the distinct gene sets of all three Chinese wild Vitis

From: Transcriptome characterization of three wild Chinese Vitis uncovers a large number of distinct disease related genes

GO ID GO term GO term level BH HN S
C* B Corrected P-value C B Corrected P-value C B Corrected P-value
GO:0050896 response to stimulus 2 47% 35% 3.73E-13 50% 35% 8.09E-26 51% 35% 1.08E-27
GO:0006950 response to stress 3 38% 24% 1.65E-22 42% 24% 2.41E-45 41% 24% 9.38E-39
GO:0006952 defense response 4 26% 11% 4.26E-37 31% 12% 2.01E-78 31% 12% 2.34E-75
GO:0098542 defense response to other organism 4 11% 7% 2.01E-02 13% 7% 2.54E-09 14% 7% 3.21E-14
GO:0009617 response to bacterium 4 9% 5% 1.11E-03 10% 5% 5.25E-07 11% 6% 8.50E-11
GO:0045087 innate immune response 4 8% 4% 5.56E-04 8% 4% 4.34E-07 9% 4% 6.53E-11
GO:0006955 immune response 3 8% 4% 3.59E-03 8% 5% 7.25E-07 9% 5% 1.87E-10
GO:0042742 defense response to bacterium 6 8% 4% 5.15E-03 9% 5% 5.20E-09 10% 5% 4.03E-12
GO:0009814 defense response, incompatible interaction 5 4% 2% 9.50E-03 4% 2% 2.86E-04 4% 2% 7.07E-05
GO:0009816 defense response to bacterium, incompatible interaction 6 3% 1% 5.15E-04 3% 1% 3.91E-05 3% 1% 1.36E-05
GO:0009626 plant-type hypersensitive response 5 2% 1% 4.62E-02 3% 1% 8.40E-07 3% 1% 3.87E-06
GO:0098581 detection of external biotic stimulus 5 1% 0% 2.98E-02 1% 0% 1.03E-02 2% 0% 4.12E-11
GO:0009804 coumarin metabolic process 6 2% 0% 1.31E-03 2% 0% 1.84E-08 1% 0% 2.91E-03
GO:0009805 coumarin biosynthetic process 6 2% 0% 1.31E-03 2% 0% 1.84E-08 1% 0% 2.91E-03
GO:0015074 DNA integration 6 3% 0% 5.21E-23 2% 0% 5.65E-10 3% 0% 3.69E-15
GO:0015916 fatty-acyl-CoA transport 7 1% 0% 7.87E-08 0% 0% 3.88E-05 0% 0% 1.12E-03
GO:1901337 thioester transport 4 1% 0% 7.87E-08 0% 0% 3.88E-05 0% 0% 1.12E-03
GO:0080001 mucilage extrusion from seed coat 5 1% 0% 1.08E-05 1% 0% 2.57E-03 1% 0% 4.89E-03
GO:0009835 fruit ripening 5 1% 0% 4.40E-03 1% 0% 1.33E-05 1% 0% 1.52E-04
  1. BH, V. pseudoreticulata accession “Baihe-13-1”; HN, V. pseudoreticulata accession “Hunan-1”; S, V. quinquangularis accession “Shang-24”.
  2. *C: frequency of distinct genes belonging to the corresponding GO terms; B: frequency of all transcripts in each wild Vitis species belonging to the corresponding GO terms.