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Table 2 Candidate T3e for host specificity identified in Moko, NPB and brown rot ecotypes

From: Comparative genomic analysis of Ralstonia solanacearum reveals candidate genes for host specificity

Gene name Alternative name Characteristics
ripAU   Absent from brown rot, present in Moko
ripAA avrA Absent from NPB, present in Moko
ripG4 GALA4 HGT from IIA Moko to IIB Moko lineages
ripAD   HGT from IIA Moko to IIB Moko lineages; HAPs between brown rot and Moko
ripAB popB HAPs between brown rot and Moko
ripAC popC HAPs between brown rot and Moko
ripAD   HAPs between brown rot and Moko
ripAE   HAPs between brown rot and Moko
ripAI   HAPs between brown rot and Moko
ripAO   HAPs between brown rot and Moko
ripAP   HAPs between brown rot and Moko
ripAY   HAPs between brown rot and Moko
ripB   HAPs between brown rot and Moko
ripC1   HAPs between brown rot and Moko
ripD avrPphD HAPs between brown rot and Moko
ripE2   HAPs between brown rot and Moko
ripF1   HAPs between brown rot and Moko
ripG2 GALA2 HAPs between brown rot and Moko
ripG3 GALA3 HAPs between brown rot and Moko
ripG6 GALA6 HAPs between brown rot and Moko
ripH1 HLK1 HAPs between brown rot and Moko
ripH2 HLK2 HAPs between brown rot and Moko
ripV1   HAPs between brown rot and Moko
ripW popW HAPs between brown rot and Moko
ripAN   HAPS between NPB and Moko