Table 2 Candidate T3e for host specificity identified in Moko, NPB and brown rot ecotypes
From: Comparative genomic analysis of Ralstonia solanacearum reveals candidate genes for host specificity
Gene name | Alternative name | Characteristics |
|---|---|---|
ripAU | Â | Absent from brown rot, present in Moko |
ripAA | avrA | Absent from NPB, present in Moko |
ripG4 | GALA4 | HGT from IIA Moko to IIB Moko lineages |
ripAD | Â | HGT from IIA Moko to IIB Moko lineages; HAPs between brown rot and Moko |
ripAB | popB | HAPs between brown rot and Moko |
ripAC | popC | HAPs between brown rot and Moko |
ripAD | Â | HAPs between brown rot and Moko |
ripAE | Â | HAPs between brown rot and Moko |
ripAI | Â | HAPs between brown rot and Moko |
ripAO | Â | HAPs between brown rot and Moko |
ripAP | Â | HAPs between brown rot and Moko |
ripAY | Â | HAPs between brown rot and Moko |
ripB | Â | HAPs between brown rot and Moko |
ripC1 | Â | HAPs between brown rot and Moko |
ripD | avrPphD | HAPs between brown rot and Moko |
ripE2 | Â | HAPs between brown rot and Moko |
ripF1 | Â | HAPs between brown rot and Moko |
ripG2 | GALA2 | HAPs between brown rot and Moko |
ripG3 | GALA3 | HAPs between brown rot and Moko |
ripG6 | GALA6 | HAPs between brown rot and Moko |
ripH1 | HLK1 | HAPs between brown rot and Moko |
ripH2 | HLK2 | HAPs between brown rot and Moko |
ripV1 | Â | HAPs between brown rot and Moko |
ripW | popW | HAPs between brown rot and Moko |
ripAN | Â | HAPS between NPB and Moko |