Table 1 De novo assembly statistics of 12 Streptococcus uberis isolates
Isolate | GenBank accession No. | Sequence size | Number of contigs (>200 bp) | Shortest contig size | Longest contig size | n50 |
|---|---|---|---|---|---|---|
EF20 | JANW00000000 | 1933244 | 18 | 369 | 1013731 | 1013547 |
6736 | JATB00000000 | 1893525 | 28 | 392 | 424329 | 386092 |
6780 | JATD00000000 | 1960858 | 26 | 409 | 404720 | 340682 |
Ab71 | JATK00000000 | 1849250 | 12 | 449 | 792968 | 425420 |
B190 | JATE00000000 | 1881868 | 20 | 450 | 1043356 | 1043142 |
B362 | JATC00000000 | 1912672 | 31 | 429 | 995597 | 995383 |
C5072 | JATI00000000 | 1906212 | 19 | 431 | 1021112 | 1020928 |
C5388 | JATF00000000 | 1837997 | 13 | 409 | 1030559 | 1030365 |
C6344 | JATA00000000 | 1907431 | 15 | 431 | 999672 | 999478 |
C8329 | JATG00000000 | 1923969 | 20 | 389 | 830811 | 455116 |
C9359 | JATJ00000000 | 1837707 | 11 | 450 | 1030658 | 1030464 |
S6261 | JATH00000000 | 1868255 | 26 | 429 | 613122 | 392636 |