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Table 1 Mutations found in T. reesei QM9136 when compared with its parent T. reesei QM6a

From: Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype

SNP_id Mutation Mutation effect Position* [nt] Transcript Element Annotation
4_329479 SNV G > C   No   
4_1496656 SNV A > T (codon : TTC > TAC; aa : F > Y) +38 Trire2:46238 exon putative S-adenosylmethionine synthetase SAM1
11_1146347 SNV C > G   No   
18_608684 SNV C > G (codon : AGT > ACT; aa : S > T) +71 Trire2:50707 exon putative cell-cycle regulated activator of the anaphase-promoting complex/cyclosome CDC1
19_523375 SNV A > G   No   
31_173856 SNV C > G (codon: CCT > GCT; aa : P > A) +1189 Trire2:124043 exon putative glycoside hydrolase family 18 CHI18-14
1_518722 InDel −1:A +19 Trire2:102500 exon MRSP1/expansin-like-orphan protein
4_1479439 InDel −1:A   No   
5_692881 InDel +1:C   No   
11_202303 InDel −1:A +2294 Trire2:122208 exon transcription factor XYR1
16_183301 InDel −1:G   Trire2:109416 promoter putative protein of unknown function
18_234489 InDel −1:A   No   
19_227418 InDel −8:GCCCGGCG +19 Trire2:66687 exon β-1,4-mannosyl-glycoprotein
β-1,4-N-acetylglucosaminyltransferase (EC
23_109645 InDel −1:T   Trire2:5387 promoter putative NADH-ubiquinone oxidoreductase
  1. *in the spliced transcript.