Table 4 Frequencies of repeat types with repeat number in the cSSRs of yam
Motif length | Repeat number | Total | % | ||||||
|---|---|---|---|---|---|---|---|---|---|
5 | 6 | 7 | 8 | 9 | 10 | >10 | |||
Dinucleotides | - | 1,530 | 1,052 | 813 | 1,029 | 933 | 431 | 5,788 | 49.08 |
Trinucleotides | 2,729 | 1,608 | 1,020 | 123 | 48 | 20 | 34 | 5,582 | 47.33 |
Tetranucleotides | 272 | 48 | 12 | 1 | 1 | 0 | 1 | 335 | 2.85 |
Pentanucleotides | 43 | 1 | 0 | 0 | 0 | 0 | 0 | 44 | 0.37 |
Hexaucleotides | 22 | 14 | 3 | 5 | 0 | 0 | 0 | 44 | 0.37 |
Total | 3,066 | 3,201 | 2,087 | 942 | 1,078 | 953 | 466 | 11,793 | - |
% | 26.00 | 27.14 | 17.69 | 7.99 | 9.14 | 8.08 | 3.95 | - | - |