Skip to main content
Figure 2 | BMC Genomics

Figure 2

From: Genomic characterization of mutant laboratory mouse strains by exome sequencing and annotation lift-over

Figure 2

Example variant position as annotated in vcf format: The only private, exonic position in Line 1, where all 4 individuals show an homozygous alternative genotype. Annotations from the exon lift-over appear in the INFO section of the vcf file: EID Ensemble exon id, GID Ensemble gene id for the exons in EID, GIR Ensembl gene id for all genes overlapping the position, GNM associated gene names for the exons in EID, GNR associated gene names for all genes overlapping the position.

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us