| Precompetent larvae | Competent larvae | Juvenile | Adult | Adult deep |
---|---|---|---|---|---|
Reads | 42,273,865 | 43,699,007 | 41,677,487 | 43,098,690 | 125,880,671 |
Quality trimmed reads | 39,234,338 | 40,546,526 | 38,587,047 | 39,976,627 | 116,384,700 |
Assembled transcripts | 107,725 | 122,306 | 101,432 | 112,187 | 230,181 |
Average transcript length | 816 | 738 | 706 | 716 | 1,278 |
Longest transcript | 14,660 | 12,052 | 9,354 | 16,961 | 29,513 |
Mapped Transcripts | 63,681 | 64,826 | 61,149 | 65,377 | 76,045 |
% Mapped/Assembled | 59.11% | 53.00% | 60.29% | 58.28% | 33.04% |
Average mapped transcript | 738 | 729 | 673 | 686 | 918 |
Longest mapped transcript | 14,393 | 12,052 | 24,959 | 16,954 | 29,166 |
Total transcripts mapped to genome | 63,681 | 64,826 | 61,149 | 65,377 | 76,045 |
Total coverage (% genome) | 28.32% | 27.92% | 29.24% | 30.31% | 21.62% |
Used for PASA | Yes | Yes | Yes | Yes | No |