From: Non-uniqueness of factors constraint on the codon usage in Bombyx mori
Amino acid | Codon | High | Low | Amino acid | Codon | High | Low | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
RSCU | N | RSCU | N | RSCU | N | RSCU | N | ||||
Ala | GCU | 0.64 | 288 | 1.66 | 315 | Asn | AAU | 0.34 | 130 | 1.39 | 549 |
GCC * | 1.80 | 818 | 0.46 | 88 | AAC * | 1.66 | 631 | 0.61 | 239 | ||
GCA | 0.29 | 133 | 1.65 | 313 | Gln | CAA | 0.44 | 174 | 1.43 | 370 | |
GCG * | 1.27 | 575 | 0.23 | 43 | CAG * | 1.56 | 615 | 0.57 | 146 | ||
Phe | UUU | 0.24 | 91 | 1.48 | 396 | Ser | UCU | 0.71 | 153 | 1.49 | 233 |
UUC * | 1.76 | 680 | 0.52 | 140 | UCC * | 1.71 | 366 | 0.44 | 69 | ||
Gly | GGU | 0.65 | 240 | 1.49 | 291 | UCA | 0.42 | 90 | 1.77 | 276 | |
GGC * | 1.91 | 703 | 0.58 | 113 | UCG * | 1.56 | 335 | 0.34 | 53 | ||
GGA | 0.75 | 277 | 1.55 | 303 | AGU | 0.34 | 72 | 1.40 | 219 | ||
GGG * | 0.69 | 254 | 0.39 | 76 | AGC * | 1.26 | 271 | 0.55 | 86 | ||
Ile | AUU | 0.34 | 99 | 1.37 | 407 | Thr | ACU | 0.57 | 146 | 1.49 | 275 |
AUC * | 2.23 | 652 | 0.39 | 115 | ACC * | 1.68 | 433 | 0.43 | 79 | ||
AUA | 0.43 | 126 | 1.24 | 368 | ACA | 0.43 | 110 | 1.85 | 343 | ||
Leu | UUA | 0.17 | 49 | 2.18 | 442 | ACG * | 1.32 | 339 | 0.23 | 43 | |
UUG | 0.61 | 179 | 1.30 | 264 | Asp | GAU | 0.38 | 226 | 1.46 | 587 | |
CUU | 0.30 | 88 | 0.89 | 181 | GAC * | 1.62 | 958 | 0.54 | 217 | ||
CUC * | 2.05 | 602 | 0.35 | 71 | Glu | GAA | 0.57 | 414 | 1.59 | 769 | |
CUA | 0.27 | 78 | 0.75 | 152 | GAG * | 1.43 | 1036 | 0.41 | 197 | ||
CUG * | 2.60 | 764 | 0.53 | 108 | His | CAU | 0.38 | 97 | 1.44 | 196 | |
Pro | CCU | 0.48 | 122 | 1.46 | 204 | CAC * | 1.62 | 416 | 0.56 | 76 | |
CCC * | 1.65 | 418 | 0.35 | 49 | Lys | AAA | 0.48 | 278 | 1.55 | 924 | |
CCA | 0.36 | 91 | 1.87 | 261 | AAG * | 1.52 | 870 | 0.45 | 269 | ||
CCG * | 1.50 | 380 | 0.32 | 45 | Arg | CGU | 0.63 | 126 | 0.76 | 81 | |
Val | GUU | 0.41 | 144 | 1.59 | 363 | CGC * | 2.49 | 495 | 0.21 | 22 | |
GUC * | 1.32 | 469 | 0.48 | 109 | CGA | 0.37 | 74 | 0.87 | 93 | ||
GUA | 0.36 | 126 | 1.26 | 289 | CGG * | 1.04 | 207 | 0.23 | 24 | ||
GUG * | 1.91 | 678 | 0.67 | 153 | AGA | 0.61 | 121 | 3.05 | 325 | ||
Cys | UGU | 0.35 | 64 | 1.50 | 179 | AGG | 0.86 | 172 | 0.89 | 95 | |
UGC * | 1.65 | 302 | 0.50 | 60 | Trp | UGG | 1.00 | 219 | 1.00 | 157 | |
Tyr | UAU | 0.29 | 100 | 1.40 | 322 | TER | UGA | 0.94 | 17 | 0.61 | 11 |
UAC * | 1.71 | 595 | 0.60 | 138 | UAA | 1.50 | 27 | 1.83 | 33 | ||
Met | AUG | 1.00 | 507 | 1.00 | 359 | UAG | 0.56 | 10 | 0.56 | 10 |