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Table 1 Samples list of Vitis vinifera cv Corvina and PN40024 clone, used for small RNA libraries

From: miRVine: a microRNA expression atlas of grapevine based on small RNA sequencing

Sample Developmental stages Replicates Library codes Modified E-L system stages
BUD Latent bud 2 Bud_L E-L 23
  Winter Bud 2 Bud_W E-L 1
  Bud burst (green tip) 2 Bud_B E-L 4
  Bud after burst (Rosette of leaf tips visible) 2 Bud_AB E-L 5
LEAF Young 2 Leaf_Y EL-14
  Mature 2 Leaf_M E-L 29
  Leaf-Senescence 2 Leaf_S E-L 43
STEM Green stem 2 Stem_G E-L 30
  Woody stem 2 Stem_W E-L 43
ROOT In vitro cultivation 2 Root  
TENDRIL Young (Pool of tendrils from shoot bearing 7 separated leaves) 2 Tendril_Y E-L 14
  Well-developed (Pool of tendrils from shoot bearing 12 separated leaves) 2 Tendril_WD E-L 17
INFLORESCENCE Young inflorescence 2 Inflorescence_Y E-L 14
  Well-developed inflorescence 2 Inflorescence_WD E-L 17
FLOWER Beginning of flowering (10% caps off) 2 Flower_FB E-L 20
  Flowering (50% caps off) 2 Flower_F E-L 23
STAMEN Pool of stamens from flowers at 10% and 50% caps off 2 Stamen E-L 20/E-L 23
POLLEN Pollens from flowers at 80% caps off 2 Pollen E-L 25
CARPEL Pool of carpels from flowers at 10% and 50% caps off 2 Carpel E-L 20/E-L 23
BERRY Fruit set 2 Berry_FS E-L 29
  Post fruit set 2 Berry_PFS E-L 31
  Pre-Veraison 2 Berry_PV E-L 34
  Veraison 2 Berry_V E-L 35
  Pre-ripening 2 Berry_MR E-L 36
  Ripening 2 Berry_R E-L 38
  Post-harvest withering (1st month) 2 Berry_PHWI  
  Post-harvest withering (2nd month) 2 Berry_PHWII  
  Post-harvest withering (3rd month) 2 Berry_PHWIII  
SEED Collected from green berries (Pool of berries from FS, PFS, PV) 1 Seed_G  
  Collected from Mature berries (Pool of berries from V, MR, R) 1 Seed_M  
RACHIS Fruit set 2 Rachis_FS E-L 29
  Post -fruit set 2 Rachis_PFS E-L 31
  Veraison 2 Rachis_V E-L 35
  Pre-ripening 2 Rachis_MR E-L 36
  Ripening 2 Rachis_R E-L 38
Total Corvina 35 68   
ROOT Pool of in vitro roots of PN40024 clone 1 Root_PN  
LEAF Pool of in vitro leaves of PN40024 clone 1 Leaf_PN  
Total PN40024 2 2