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Fig. 1 | BMC Genomics

Fig. 1

From: CMRegNet–An interspecies reference database for corynebacterial and mycobacterial regulatory networks

Fig. 1

Binding sites pipeline. (a) Table from TBDB with relation (gene target – regulator) and their respective coordinates; (b) GenomeView to visualize in the genomic context; (c) The different cases of inconsistency: (i) Overlap - When it has the overlapping region with neighbour’s intragenic regions; (ii) Distance - When the region is more distant than the chosen threshold; (iii) Size - When the size transcends the threshold; (iv) Operon - case where peak regions are intraoperon; and (d) Output file, each multi-FASTA corresponds a regulator

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