Table 1 Summary of the B. argenteum transcriptome assembly and annotation
Reads | Total Raw Reads | 62,112,418 |
Total Clean Reads | 54,787,000 | |
Clean Nucleotides (nt) | 4,930,830,000 | |
Reads length (nt) | 90 × 2 | |
Q20 percentage | 98.67Â % | |
GC percentage | 52.05Â % | |
Contigs | Total Number | 106,066 |
Total Length (nt) | 43,542,237 | |
Mean Length (nt) | 411 | |
N50 (nt) | 908 | |
Unigenes | Total Number | 57,247 |
Distinct Clusters | 14,108 | |
Distinct Singletons | 43,139 | |
Total Length (nt) | 49,383,291 | |
Mean Length (nt) | 863 | |
N50 (nt) | 1,372 | |
L50 number | 11,094 | |
Min Unigene Length (nt) | 200 | |
Max Unigene Length (nt) | 14,247 | |
Average Depth (×) | 85.38 | |
Annotation | NCBI-nr | 35,813 (62.6Â %) |
Swiss-Prot | 20,864 (39.9Â %) | |
KEGG | 21,607 (37.7Â %) | |
COG | 16,715 (29.2Â %) | |
GO | 23,509 (41.1Â %) | |
All | 36,446 (63.7Â %) |