Table 3 Lily putative orthologues of vernalization-related genes and their expression in bulb meristems during cold exposure. Gene expression during cold exposure is schematically represented based on the log-fold change from week 0 to 9 at 4 °C
Gene product/Species | Putative ortholog in lily | Protein identity (%) | Conserved domains | Flowering Enhancer/Repressor | Expression profile in lily meristem during cold exposurea | Reference |
|---|---|---|---|---|---|---|
FD / Arabidopsis | Comp189117-c0 | 72 | bZIP | Enhancer |
| [71] |
FT / Arabidopsis | Comp184710-c4 | 68 | PEBP | Enhancer |
| [72] |
SOC1 / Arabidopsis | Comp189264-c0 | 63 | MADS-box, K-Box | Enhancer |
| [73] |
VIP4 / Arabidopsis | Comp178334-c0 | 53 | Â | Enhancer |
| [74] |
VRN A1, VRN1 / Wheat, Barley | Comp176908_c0 | 59 | MADS-Box, K-Box | Enhancer |
| [75] |
VRN B3, VRN H3 / Wheat, Barley | Comp178222_c0 | 70 | PEBP | Enhancer |
| [26] |
VRN2 / Arabidopsis | Comp184285-c0 | 44 | Polycomb | Enhancer |
| [76] |
EMF2 / Arabidopsis | Comp184487-c0 | 53 | Polycomb | Enhancer |
| [77] |
VIN3 / Arabidopsis | Comp174259-c0 | 41 | PHD-type Zinc finger | Enhancer |
| [21] |
VIP6 (ELF8) / Arabidopsis | Comp120922-c0 | 65 | TPR | Enhancer |
| [78] |
SUF4 / Arabidopsis | Comp183048-c0 | 53 | C2H2-type Zinc finger | Repressor |
| [79] |
SVP / Arabidopsis | Comp176786-c0 | 62 | MADS-Box, K-Box | Repressor |
| [80] |
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