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Table 1 Details of 37 ABC transporter genes and the translated proteins identified in lampreys

From: Genome-wide analysis of the ATP-binding cassette (ABC) transporter gene family in sea lamprey and Japanese lamprey

Gene name Sea lamprey (SL) Japanese lamprey (JL) Concatenation of SL and JL Referenceb (aa)
Acc. No. mRNA (bp) Protein (aa) CDS statusa mRNA (bp) Protein (aa) CDS status mRNA (bp) Protein (aa) Domain structure CDS status
ABCA1a KM232912 4371 1457 P 6588 2195 C 6786 2276 (TMD-NBD)2 C 2261
ABCA1b KM232913 609 203 P 4416 1471 P 4416 1471 TMD-NBD-TMD P 2261
ABCA2 KM232914 4614 1537 P 7053 2350 C 7521 2457 (TMD-NBD)2 C 2433
ABCA3 KM232915 7248 1725 C 4455 1484 C 7248 1725 (TMD-NBD)2 C 1704
ABCA4 KM232916 3180 1059 P 6348 2116 C 6348 2116 (TMD-NBD)2 C 2310
ABCA5 KM232917 5366 1679 C 3762 1253 P 5366 1679 (TMD-NBD)2 C 1642
ABCA12 KM232918 6737 1832 P 5492 1829 P 6737 1832 (TMD-NBD)2 P 2595
ABCB1 KM232919 4585 1288 C 3750 1249 C 4585 1288 (TMD-NBD)2 C 1276
ABCB1-like KM232920 2256 751 P 3018 1005 P 3132 1043 TMD-?-TMD-NBD P 1276
ABCB5 - - - - 3570 1189 C 3570 1336 (TMD-NBD)2 C 1255
ABCB6 KM232921 4180 857 C 2382 793 C 4180 857 TMD-NBD C 842
ABCB7 KM232922 2241 729 C - - - 2242 729 TMD-NBD C 752
ABCB8 KM232923 2371 709 C 2118 705 C 2371 709 TMD-NBD C 717
ABCB9 KM232924 3063 807 C 2385 795 C 3063 807 TMD-NBD C 762
ABCB10 KM232925 3635 754 C 2265 754 C 3635 754 TMD-NBD C 715
ABCB10-like KM232926 2370 790 C 2259 752 C 2370 790 TMD-NBD C 715
ABCB11 KM232927 5241 1320 C 2853 950 P 5241 1320 (TMD-NBD)2 C 1321
ABCC1 KM232928 1484 444 P 4044 1347 P 4658 1501 (TMD-NBD)2 C 1528
ABCC2 KM232929 7002 1558 C 4034 1344 P 7002 1558 (TMD-NBD)2 C 1543
ABCC3a KM232930 5876 1556 C 4260 1419 P 5876 1556 (TMD-NBD)2 C 1522
ABCC3b KM232931 3500 1166 P 2859 952 P 3502 1166 (TMD-NBD)2 P 1522
ABCC4 KM232932 4176 1303 C 2070 689 P 4176 1303 (TMD-NBD)2 C 1325
ABCC5 KM232933 3093 1009 P 4236 1411 C 4383 1439 (TMD-NBD)2 C 1436
ABCC7 KM232934 4606 1466 C 3180 1059 P 4606 1466 (TMD-NBD)2 C 1476
ABCC8 KM232935 4737 1578 C 4311 1436 P 4737 1578 (TMD-NBD)2 C 1588
ABCC9 KM232936 4850 1596 C 4383 1460 P 4850 1596 (TMD-NBD)2 C 1588
ABCC10 KM232937 5922 1584 C 4710 1569 C 5922 1584 (TMD-NBD)2 C 1460
ABCD2 KM232938 2954 791 C 2379 792 C 2954 791 TMD-NBD C 741
ABCD3 KM232939 1990 659 C 1980 659 C 1990 659 TMD-NBD C 659
ABCD4 KM232940 2033 633 C 1902 633 C 2033 633 TMD-NBD C 606
ABCE1 KM232941 2386 599 C 1800 599 C 2386 599 NBD-NBD C 599
ABCF1 KM232942 2773 740 C 2508 835 C 3037 828 NBD-NBD C 837
ABCF2 KM232943 5349 614 C 1845 614 C 5349 614 NBD-NBD C 628
ABCF3 KM232944 3774 712 C 2022 673 C 3774 712 NBD-NBD C 709
ABCG2a KM232945 2790 703 C 2100 699 C 2790 703 NBD-TMD C 657
ABCG2b KM232946 2521 666 C 1737 578 C 2521 666 NBD-TMD C 657
ABCG4 KM232947 1977 658 C 1959 652 C 1977 658 NBD-TMD C 646
  1. aP indicates partial sequence, C indicates complete sequence. bReference indicates the length of the protein in mouse