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Table 6 Distribution of pneumocyclicin cassette alleles among pneumococcal clonal complexes (CCs)

From: Genomic analyses of pneumococci reveal a wide diversity of bacteriocins – including pneumocyclicin, a novel circular bacteriocin

 

Clonal complex:

1094

124

199

66

113

156/162

439

Other CCa

Total (n)

 

No. of genomes:

22

19

12

10

10

10

9

23

115

 

Years of isolation:

1978-1988

1952-2005

1999-2005

1952-2007

1939-1999

1962-2008

1945-1996

1916-2007

1916-2008

Cluster A alleles

11

 

16

     

1

17

26

14

      

1

15

4

  

7

   

6

1

14

2

   

10

   

0

10

25

7

      

0

7

1

    

7

  

0

7

19

     

5

 

0

5

Otherb

1

2

5

0

3

5

3

12

31

Total A

22

18

12

10

10

10

9

15

106

Cluster B alleles

36

 

1

     

2

3

37

       

2

2

40

       

1

1

39

       

1

1

35

       

1

1

38

       

1

1

Total B

 

1

     

8

9

  1. aEach of the ‘Other’ CCs contributed ≤3 isolates to the Other CCs total
  2. bEach of the ‘Other’ alleles was detected 1 or 2 times
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BMC Genomics

ISSN: 1471-2164

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