Table 5 Level 2 GO terms of the modified gene annotations (_M) between RRes and the MIPS counterparts. GO summaries were extracted using Blast2GO
From: The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum
Biological process | ||||
|---|---|---|---|---|
GO-id | GO-term | RRes No. | MIPS No. | Diff No. |
GO:0032501 | multicellular organismal process | 8 | 3 | 5 |
GO:0048511 | rhythmic process | 2 | 1 | 1 |
GO:0022610 | biological adhesion | 7 | 7 | 0 |
GO:0051704 | multi-organism process | 6 | 3 | 3 |
GO:0051179 | localization | 165 | 150 | 15 |
GO:0008152 | metabolic process | 617 | 539 | 78 |
GO:0023052 | signalling | 30 | 26 | 4 |
GO:0000003 | reproduction | 4 | 4 | 0 |
GO:0009987 | cellular process | 482 | 428 | 54 |
GO:0050896 | response to stimulus | 72 | 56 | 16 |
GO:0065007 | biological regulation | 152 | 112 | 40 |
GO:0002376 | immune system process | 1 | 0 | 1 |
GO:0040007 | growth | 1 | 1 | 0 |
GO:0044699 | single-organism process | 408 | 357 | 51 |
GO:0032502 | developmental process | 10 | 5 | 5 |
GO:0022414 | reproductive process | 3 | 1 | 2 |
GO:0040011 | locomotion | 1 | 0 | 1 |
GO:0071840 | cellular component organization or biogenesis | 52 | 41 | 11 |
Total | 2021 | 1734 | 287 | |
Molecular function | Â | |||
GO-id | GO-term | RRes | MIPS | Diff |
GO:0004872 | receptor activity | 6 | 3 | 3 |
GO:0060089 | molecular transducer activity | 7 | 5 | 2 |
GO:0001071 | nucleic acid binding transcription factor activity | 79 | 55 | 24 |
GO:0005198 | structural molecule activity | 21 | 20 | 1 |
GO:0005085 | guanyl-nucleotide exchange factor activity | 2 | 2 | 0 |
GO:0009055 | electron carrier activity | 5 | 5 | 0 |
GO:0016209 | antioxidant activity | 5 | 5 | 0 |
GO:0030234 | enzyme regulator activity | 4 | 4 | 0 |
GO:0005488 | binding | 514 | 491 | 23 |
GO:0003824 | catalytic activity | 488 | 449 | 39 |
GO:0005215 | transporter activity | 75 | 72 | 3 |
Total | 1206 | 1111 | 95 | |