Characterization and comparative profiling of the small RNA transcriptomes in two phases of flowering in Cymbidium ensifolium

Table 3 The category of all small RNA in four libraries from two flowering phases

Types	Mean Reads	Mean Percent	Flowering Phase I				Flowering Phase IV
	Mean Reads	Mean Percent	PS1A Reads	PS1A Percent	PS1B Reads	PS1B Percent	PS4A Reads	PS4A Percent	PS4B Reads	PS4B Percent
Total	2,941,739.25	100.00 %	2,807,112	100.00 %	3,605,560	100.00 %	2,456,095	100.00 %	2,898,190	100.00 %
conserved miRNA	11,935.75	0.41 %	8,417	0.30 %	14,261	0.40 %	13,059	0.53 %	12,006	0.41 %
rRNA	182,343.00	6.15 %	170,965	6.09 %	241,271	6.69 %	138,161	5.63 %	178,975	6.18 %
tRNA	14,702.75	0.54 %	33,385	1.19 %	3,937	0.11 %	18,195	0.74 %	3,294	0.11 %
snRNA	11,569.50	0.41 %	37,868	1.35 %	1,539	0.04 %	4,455	0.18 %	2,416	0.08 %
snoRNA	9,030.75	0.31 %	9,925	0.35 %	6,176	0.17 %	6,058	0.25 %	13,964	0.48 %
repeat	41,823.75	1.42 %	31,818	1.13 %	55,054	1.53 %	35,002	1.43 %	45,421	1.57 %
novel_miRNA	37,403.00	1.30 %	24,024	0.86 %	48,050	1.33 %	54,596	2.22 %	22,942	0.79 %
TAS	349.5	0.01 %	336	0.01 %	434	0.01 %	335	0.01 %	293	0.01 %
uncharacterized group	2,632,581.25	89.45 %	2,490,374	88.72 %	3,234,838	89.72 %	2,186,234	89.01 %	2,618,879	90.36 %

ISSN: 1471-2164