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Table 1 Differentially expressed genes that are potentially involved in chromatin remodelling

From: The impact of chromatin remodelling on cellulase expression in Trichoderma reesei

Transcript ID Annotation SO/G p-value Δxyr1/WT p-value
2648 Predicted component of NuA3 histone acetyltransferase complex −1.154 0.000 0.279 0.653
34402 Histone H1 1.300 0.000 −0.457 0.075
36727 SWI-SNF chromatin-remodeling complex protein 1.493 0.000 −0.843 0.000
53947 SWI-SNF chromatin-remodeling complex protein 1.196 0.000 1.332 0.000
56077 SWI-SNF chromatin-remodeling complex protein 3.050 0.000 −0.359 0.158
65533 Histone deacetylase complex, catalytic component HDA1 1.237 0.000 −0.347 0.170
73708 Heterochromatin-associated protein HP1 and related CHROMO domain proteins −3.012 0.002 1.253 0.000
76872 SWI-SNF chromatin-remodeling complex protein 1.070 0.000 −0.708 0.004
81517 Sirtuin 5 and related class III sirtuins (SIR2 family) 1.600 0.034 −0.160 0.615
108909 Nucleosome-binding factor SPN, POB3 subunit 1.050 0.000 0.041 0.998
110409 Possible homologue of S. cerevisiae SAS10 −1.298 0.000 −0.001 1.000
110418 SWI-SNF chromatin-remodeling complex protein 1.180 0.000 −0.566 0.049
110507 Histone acetyltransferase (MYST family) 1.064 0.000 −0.562 0.024
122943 SWI-SNF chromatin-remodeling complex protein 1.876 0.000 −0.127 0.621
123327 SWI-SNF chromatin-remodeling complex protein 1.852 0.002 0.508 0.036
  1. Differential gene expression according to WTSS analysis comparing either sophorose induction (SO) to glucose repression (G) in the wild-type strain or the xyr1 deletion strain (Δxyr1) to the wild-type strain (WT) under sophorose induction