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Table 3 Expression of pea genes involved in hormonal signalling pathways

From: Deciphering common and specific transcriptional immune responses in pea towards the oomycete pathogens Aphanomyces euteiches and Phytophthora pisi

Description

Genea

P6hpi

A6hpi

P20hpi

A20hpi

Lipoxygenase (LOX)

AY515253_32.4

1.0

0.8

1.2

1.5 b

 

AC146571_7.4

0.7

0.7

2.3 b

1.3

 

AC140032_2.4

0.8

0.8

1.5 b

1.3

 

AC149580_13.5

0.6 b

0.6 b

1.0

0.7

 

AC149638_35.4

0.9

1.1

0.8

0.7

 

AC149580_9.5

0.9

0.9

1.0

0.8

 

AC149580_19.5

0.9

1.0

0.8

0.9

 

AC140032_6.4

0.9

1.0

0.9

0.8

 

AC140032_7.4

1.0

1.1

1.0

1.0

Jasmonate O-methyltransferase

AC152936_2.5

1.6

0.9

1.3

1.7 b

 

CU024875_36.4

1.1

1.1

0.7

0.8

Aminocyclopropane-carboxylate oxidase (ACO)

AC146817_44.4

1.1

1.4

1.2

1.2

 

AC174337_3.4

1.0

1.3

0.8

1.3

 

AC169513_37.4

2.0 b

1.8 b

0.6

0.9

 

AC125389_65.5

1.6 b

1.3

1.1

0.9

 

AC119419_24.4

1.4

1.0

0.8

0.8

 

AC158372_38.4

1.5

1.4

0.6 b

0.7

 

AC146817_41.4

0.8

0.5

2.9 b

2.1

 

AC174337_15.4

1.2

0.9

2.0 b

1.4

 

AC202309_24.3

1.3

1.1

1.5 b

0.7

 

AC124966_44.4

1.3

1.2

0.9

1.8 b

 

CT025839_48.5

1.0

0.5 b

1.2

1.4

 

CU013517_26.4

1.0

0.9

1.3

1.0

 

AC197464_13.4

1.0

1.0

0.9

0.8

 

AC158372_65.4

1.0

1.1

0.7

0.6 b

 

AC169513_36.4

0.9

1.0

0.8

0.7

 

AC158372_67.4

0.7

0.8

0.7

0.7

 

AC158372_42.4

1.0

1.0

0.9

0.7

 

AC169513_23.4

0.8

0.7

0.9

1.0

 

AC169513_26.4

0.9

0.8

1.0

1.1

Ethylene-responsive transcription factor (ERF)

AC145767_15.4

1.0

1.0

1.3

1.6

Ethylene insensitive 3 (EIN3)

AC196764_17.3

0.9

0.9

1.0

1.3

Auxin-induced protein (SAUR)

CU326390_14.3

1.1

1.1

1.3

1.9 b

 

AC149578_14.4

1.0

1.0

1.3

1.3

 

AC148242_22.4

1.1

1.0

1.4

1.2

 

AC148242_37.4

1.0

1.0

1.2

1.3

 

AC148242_50.4

1.1

1.3

1.2

1.7 b

 

AC148242_51.4

1.0

1.0

1.1

1.4

 

AC146705_44.5

1.0

1.1

1.2

1.2

 

AC146705_10.5

1.1

1.0

1.2

1.3

 

AC146705_14.5

1.1

1.1

1.2

1.1

 

AC146705_13.5

0.9

1.0

1.2

1.7 b

 

AC146705_14.5

1.1

1.1

1.2

1.1

 

CU024876_8.4

0.9

1.1

1.3

1.1

 

CU024876_38.4

1.1

1.1

1.3

1.2

 

AC146705_4.5

1.4

1.2

0.8

0.8

Auxin transporter-like protein 2-like

CT030165_15.5

1.0

1.0

0.9

0.8

Auxin-responsive protein

CU459036_7.3

1.0

1.0

1.0

0.9

 

AC152423_24.4

1.0

0.9

1.3

1.1

Cullin-like protein1

AC150246_30.4

1.5

0.9

0.7

0.3

 

CR931807_17.5

4.9 b

1.3

1.4

0.6

 

CR956619_45.5

2.2 b

1.3

0.7

0.8

 

CT573078_55.5

2.3 b

1.7

0.3

0.5

 

AC121235_22.5

1.7

2.1 b

1.2

1.3

Pathogenesis-related protein 1A

AC150778_28.5

1.1

1.3

1.2

2.6 b

Abscisic acid receptor PYL4-like

CT967319_16.4

1.0

1.0

1.0

1.1

Abscisic acid-insensitive 5-like protein 2-like

AC146910_18.5

1.2

1.2

0.9

1.1

Gibberellin receptor GID1c-like

AC188382_8.4

1.0

1.0

0.9

0.9

F-box family protein

AC146792_3.5

0.9

1.0

1.0

0.8

Transcription factor HBP-1b -like

AC157891_47.4

1.0

1.0

0.9

0.9

Two-component response regulator ARR9-like

AC153125_5.5

0.7

0.4 b

0.5 b

0.5 b

TGACG-sequence-specific DNA-binding protein

AC202316_14.3

0.9

0.9

0.8

0.9

BTB/POZ ankyrin repeat protein

AC147961_14.5

0.9

1.0

0.9

0.9

Protein phosphatase 2C 37-like

CR954191_11.4

0.9

0.9

0.9

1.0

Acyl-CoA oxidase

CT573502_1.5

1.1

1.1

1.1

1.2

  1. aRefers to the gene accession numbers in M. truncatula A17 genome version 2 (Mt2.0)
  2. Numbers indicate fold change (FC) ratios of expression levels of genes involved in hormonal signalling at 6 hpi and 20 hpi in response to A. euteiches and P. pisi compared with mock inoculation. A6hpi and A20hpi correspond to the expression values in response to A. euteiches at 6 hpi and 20 hpi, respectively, while P6hpi and P20hpi correspond to the expression values in response to P. pisi at 6 hpi and 20 hpi, respectively. Bold values indicate if the treatment FC is significantly (P ≤ 0.05) different from the control. bIndicate if the FC expression levels are differentially expressed (P ≤ 0.05, ≥ 1.5 fold induction or ≤ 0.67 fold repression)
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BMC Genomics

ISSN: 1471-2164

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