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Table 3 Bacteriophage DLP1 genome annotation

From: The isolation and characterization of two Stenotrophomonas maltophilia bacteriophages capable of cross-taxonomic order infectivity

Gene Start End Putative function Strand Length (AA) Closest relative Percent identity Source GenBank accession number
1 1 255 Hypothetical protein + 84 ORF001 100 PA73 YP_001293408.1
2 252 518 Holin + 88 Holin 99 PA25 YP_006299866.1
3 511 1,056 Endolysin + 181 Endolysin 98 PA25 YP_006299867.1
4 1068 1373 Rz + 101 Rz 99 Ab26 YP_009044338.1
5 1288 1569 Rz1 + 93 Rz1 100 PA25 YP_006299869.1
6 1627 2115 Small terminase + 162 Small terminase 99 PA25 YP_006299870.1
7 2096 3691 Large terminase + 531 Large terminase 100 Ab26 YP_001293413.1
8 3705 5210 Portal protein + 501 Portal protein 98 Ab26 YP_009044342.1
9 5222 6316 F-like head morphogenesis protein + 364 ORF008 100 PA73 YP_001293415.1
10 6353 7072 Scaffold protein + 239 Scaffold protein 100 PA25 YP_006299874.1
11 7075 8052 Major capsid protein + 325 ORF010 99 PA73 YP_001293417.1
12 8122 8526 Hypothetical protein + 134 ORF011 100 PA73 YP_001293418.1
13 8592 8993 Hypothetical protein + 133 ORF12 71 Ab26 YP_009044347.1
14 9005 9523 Hypothetical protein + 172 Hypothetical protein 92 Ab26 YP_009044348.1
15 9527 9907 Head-tail joining protein + 126 Hypothetical protein 98 PA25 YP_006299879.1
16 9904 10,359 Minor tail protein + 151 ORF015 97 PA73 YP_001293422.1
17 10,372 11,907 Major tail tube protein + 511 Major tail tube protein 99 PA25 YP_006299881.1
18 11,971 12,399 Tail chaperonin + 142 ORF017 100 PA73 YP_001293424.1
19 12,408 12,764 Tail chaperonin + 118 Tail chaperonin 100 PA25 YP_006299882.1
20 12,733 13,167 Hypothetical protein + 144 ORF019 100 PA73 YP_001293426.1
21 13,173 16,708 Tape measure protein + 1175 Tape measure protein 96 PA25 YP_006299885.1
22 16,701 17,663 Hypothetical protein + 320 Hypothetical protein 87 PA25 YP_006299886.1
23 17,663 18,628 Hypothetical protein + 321 Hypothetical protein 64 PA25 YP_006299887.1
24 18,634 20,346 Hypothetical protein + 570 Hypothetical protein 96 PA25 YP_006299888.1
25 20,346 21,170 Hypothetical protein + 274 Hypothetical protein 99 PA25 YP_006299889.1
26 21,174 23,615 Central tail hub + 813 Central Tail Hub 99 PA25 YP_006299890.1
27 23,616 25,667 DNA polymerase - 683 DNA polymerase 99 PA25 YP_006299891.1
28 25,679 26,821 Replicative clamp - 380 Replicative clamp 99 PA25 YP_006299892.1
29 26,805 27,161 Hypothetical protein - 118 ORF028 97 PA73 YP_001293435.1
30 27,166 28,821 DEAD box helicase - 551 ORF029 100 PA73 YP_001293436.1
31 28,814 29,911 RecB exonuclease - 365 ORF030 100 PA73 YP_001293437.1
32 29,817 30,344 Hypothetical protein - 175 gp055 41 EamP-S6a YP_007005791.1
33 30,423 31,169 Hypothetical protein - 248 Member of the DUF669 phage protein family 99 PA25 YP_006299897.1
34 31,228 31,944 RecA - 238 RecA 99 Ab26 YP_009044366.1
35 31,999 32,439 Hypothetical protein - 146 ORF033 99 PA73 YP_001293440.1
36 32,516 33,073 MazG - 185 MazG 89 PA25 YP_006299900.1
37 33,193 33,399 Transcriptional regulator + 68 ORF035 100 PA73 YP_001293442.1
38 33,389 35,710 Replicative primase/helicase + 773 Replicative primase/helicase 99 PA25 YP_006299902.1
39 35,862 36,062 Hypothetical protein + 66 Hypothetical protein 99 Ab26 YP_009044372.1
40 36,107 36,256 Hypothetical protein + 49 KAK25_00040 96 PA25 YP_006299904.1
41 37,055 37,234 Hypothetical protein + 59 Hypothetical protein ORF0038 92 PA73 YP_001293445.1
42 37,231 37,527 Hypothetical protein + 98 ORF0039 98 PA73 YP_001293446.1
43 37,524 37,703 Hypothetical protein + 59 Hypothetical protein 90 Ab26 YP_009044375.1
44 37,678 37,920 Hypothetical protein + 80 Hypothetical protein 96 Ab26 YP_009044376.1
45 38,003 38,224 Hypothetical protein + 73 X805_23910 56 DSM 6575b KDB52021.1
46 38,271 38,645 Hypothetical protein + 124 KAK25_00046 99 PA25 YP_006299910.1
47 38,706 38,927 Hypothetical protein + 73 KAK25_00047 97 PA25 YP_006299911.1
48 38,924 39,415 Vsr endonuclease + 163 Vsr endonuclease 78 KL1c YP_006560795.1
49 39,403 39,618 Hypothetical protein + 71 Hypothetical protein 99 Ab26 YP_009044380.1
50 39,615 39,794 Hypothetical protein + 59 KAK25_00050 95 PA25 YP_006299914.1
51 39,855 40,154 Hypothetical protein + 99 ORF0045 81 PA73 YP_001293452.1
52 40,171 40,461 Hypothetical protein + 96 ORF0046 99 PA73 YP_001293453.1
53 40,454 40,687 Hypothetical protein + 77 KAK25_00053 100 PA25 YP_006299917.1
54 40,983 41,450 dCMP deaminase + 155 dCMP deaminase 98 PA25 YP_006299919.1
55 41,456 41,839 Hypothetical protein + 127 ORF0050 100 PA73 YP_001293457.1
56 41,874 42,083 Hypothetical protein + 69 ORF0051 96 PA73 YP_001293458.1
57 42,167 42,739 Hypothetical protein + 190 ORF0052 99 PA73 YP_001293459.1
  1. a Erwinia phage vB_EamP-S6
  2. b Sphaerotilus natans subsp. natans DSM 6575
  3. cKL1 is Burkholderia phage KL1