Table 2 PAML analyses of candidate and ZP genes with M7 & M8 models
From: Gonadal transcriptomics elucidate patterns of adaptive evolution within marine rockfishes (Sebastes)
Species | Gene ID | Ka/Ks | EST length | M7 vs. M8 | Sites under selection |
|---|---|---|---|---|---|
S. goodei, S. saxicola, S. caurinus, and S. rastrelliger | fkb12 | 1.342 | 201 | 14.733 | 22 (0.997**), 45 (0.952*), 48(0.971*), 53 (0.997**), and 67 (0.992**) |
S. goodei, S. saxicola, S. caurinus, and S. rastrelliger | r19 | 1.432 | 300 | Not-Significant | N/A |
S. goodei, S. saxicola, S. caurinus, and S. rastrelliger | taf12 | 0.372 | 231 | Not-Significant | N/A |
S. goodei, S. saxicola, S. caurinus, and S. rastrelliger | tm50a | 2.163 | 279 | 20.773 | 90 (0.996*), 91 (0.977*), 92 (0.977*), and 93 (0.958*) |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | cox5a | 0.04 | 297 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | cp058 | 0.252 | 294 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | cwc15 | 0.067 | 336 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | if2g | 0.116 | 420 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | ino1a | 0.142 | 456 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | ls14b | 3.62 | 396 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | pri2 | 0.376 | 333 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | sirt5 | 0.174 | 297 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | tm50a | 0.214 | 231 | Not-Significant | 50 (0.994**) |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | tsn | 0.129 | 237 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | znhi3 | 0.222 | 282 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | zpax | 0.295 | 477 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | zpb | 0.248 | 663 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | zpc1 | 0.368 | 567 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | zpc4 | 0.437 | 315 | Not-Significant | N/A |
S. goodei, S. saxicola, Oryzias latipes, and Oreochromis niloticus | zpc5 | 0.275 | 483 | Not-Significant | N/A |