Fig. 4

Relative positions of the genes in PWY-735 on the maize chromosomes. Thick vertical lines depict chromosomes 1–10 (left to right). Genes with notations were associated with a tagSNP and contributed to the enrichment score calculation. Notations: *gene had a negative effect value, **gene had p < 0.1 and effect < −0.1, † gene had a positive effect value. Numbers to the left of the chromosome refer to the pathway step catalyzed. Genes that lacked notations did not contribute to the enrichment score because they lacked polymorphisms among the lines in the association panel or lacked sequenced reads from the region. See text for abbreviations of gene function and EC number of the reaction catalyzed