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Table 1 General features of the reads, contigs, and draft genome sequences of Lactobacillus fermentum 222 and L. plantarum 80

From: Comparative genome analysis of the candidate functional starter culture strains Lactobacillus fermentum 222 and Lactobacillus plantarum 80 for controlled cocoa bean fermentation processes

Statistics

L. fermentum 222

L. plantarum 80

Reads

 Total bases

225,141,845

234,878,528

 Number of reads

571,369

621,544

 Average read length

394.65

378.34

 Median read length

435

416

Assembly

 Number of contigs

73

67

 N50 contigs

55,702

92,828

 Depth of coverage

104

65

 Average length

26,717

48,130

 Longest contig

159,496

312,995

Draft genome sequences

 

 Estimated genome size (Mb)a

2.2

3.6

 Total contig length (bp)

1,950,408

3,224,773

 G+C content (%)

52.08

44.36

 Number of CDS

1,864

3,123

 Coding density (%)

83.00

83.00

 Average gene length (bp)

869

857

 Number of rRNA operonsb

6

5

 Number of tRNAs

54

67

  1. aEstimation according to Newbler
  2. bEstimation based on contig coverage