|
Sequencing results
|
Total
|
Aligned
|
Assembled
|
|---|
|
Number of readsa
|
1,081,284
|
999,150
|
936,525
|
|
Number of bases
|
432,542,060
|
401,519,734
|
380,523,665
|
|
Assembly statistics
|
Singletons
|
Number of Contigs (Contigs >500 bp)
|
Isotigs
|
|
Number of sequences
|
54,418
|
25,904 (14,459)
|
21,233
|
|
Number of bases
|
20,109,580
|
19,120,348 (16,952,075)
|
32,183,643
|
|
Average sequence size (bp)
|
355
|
738 (1,172)
|
1,515
|
|
Length of N50 sequence (bp)b
|
451
|
1,249 (1,373)
|
1,373
|
-
aAfter quality filtering steps and removal of outliers such as adaptor sequences and repeats
-
bN50 is a weighted median statistic, such that 50% of all bases are contained in sequences ≥N50 length
