Skip to main content

Table 3 Sequencing results and assembly statistics

From: Evolutionary divergence of core and post-translational circadian clock genes in the pitcher-plant mosquito, Wyeomyia smithii

Sequencing results Total Aligned Assembled
Number of readsa 1,081,284 999,150 936,525
Number of bases 432,542,060 401,519,734 380,523,665
Assembly statistics Singletons Number of Contigs (Contigs >500 bp) Isotigs
Number of sequences 54,418 25,904 (14,459) 21,233
Number of bases 20,109,580 19,120,348 (16,952,075) 32,183,643
Average sequence size (bp) 355 738 (1,172) 1,515
Length of N50 sequence (bp)b 451 1,249 (1,373) 1,373
  1. aAfter quality filtering steps and removal of outliers such as adaptor sequences and repeats
  2. bN50 is a weighted median statistic, such that 50% of all bases are contained in sequences ≥N50 length