Table 4 Circadian clock genes, their role in the clock, properties of their Wyeomyia smithii transcripts and their relationship to homologs in Drosophila melangaster and Aedes aegypti
Genea | Transcriptb | A. aegypti AAEL- c | E-valued | ProtTest Model | FBgn- | Ortho DB EOG7-e | Nucleo- tides | Relative Rate |
|---|---|---|---|---|---|---|---|---|
CkIIα | 15735 | 012094 | 0 | Dayhoff+G+F | 0264492 | 4RCF1 | 451 | 0.102 |
Clk | 2GK8YT | 012562 | 0 | JTT+G+F | 0023076 | NSNR1 | 1,865 | 0.679 |
cry2 | 05165 | 002602 | 4E-173 | LG+G | --- | P64PH | 634 | 0.298 |
Cul3 | 07535 | 006291 007187 | 0 | LG+G | 0261268 | TN9FJ | 1,771 | 0.348 |
cwo | 15437 | 010513 | 0 | LG+G+F | 0259938 | XDP58 | 2,313 | 1.792 |
cyc | 17314 | 002049 | 7 E-86 | JTT+G | 0023094 | 7TBTD | 851 | 0.390 |
dbt | 08662 | 002226 | 1E-144 | JTT+G | 0002413 | 2CGPS | 527 | 0.866 |
jet | 03197 | 012126 | 1 E-93 | LG+G+F | 0031652 | NSNRX | 1,004 | 1.572 |
kayα | 13013 | 008953 | 8 E-145 | LG+G+F | 0001297 | 06BFN | 1,162 | 1.625 |
nmo | 17870 | 004797 | 0 | JTT+G | 0011817 | JF2MQ | 2,130 | 0.254 |
Pdp1 | 02480 | 005255 | 8 E-145 | LG+I | 0016694 | 2RZNP | 3,083 | 0.602 |
per | 1A331S | 008141 | 1 E-76 | JTT+G | 0003068 | MHBMZ | 2,670 | 1.500 |
PP2A-B' | 04554 | 014031 | 0 | LG+G | 0042693 | S57VZ | 721 | 0.463 |
sgg | 17080 | 005238 | 0 | Dayhoff + G | 0003371 | D2S3R | 2641 | 0.455 |
slimb | 03120 | 003371 | 0 | JTT+G | 0023423 | WHV0D | 2,355 | 0.559 |
tim | 06527 | 006411 | 1 E-61 | JTT+G+F | 0014396 | DG81S | 2,752 | 0.793 |
vri | 08372 | 011371 | 7 E-133 | JTT+I+G+F | 0173452 | HXQF6 | 2,465 | 1.234 |