Table 3 Top gene ontology clusters of SDE genes between liver samples from juvenile and laying hens
Categorya | Term ID | Term | Genes | P-value |
|---|---|---|---|---|
GOTERM_BP_FAT | GO:0016125 | Sterol metabolic process | APOB, APOA1, HMGCR, CYP7A1, LCAT, INSIG1, FDPS, LSS, SC4MOL, VLDLR, DHCR24 | 1.68E-07 |
GOTERM_BP_FAT | GO:0008203 | Cholesterol metabolic process | APOB, APOA1, HMGCR, CYP7A1, LCAT, INSIG1, FDPS, LSS, VLDLR, DHCR24 | 7.58E-07 |
SP_PIR_KEYWORDS | Â | Lipid metabolism | FAR1, APOB, APOA1, LCAT, INSIG1, ACSBG2, AACS, VLDLR | 1.15E-05 |
GOTERM_BP_FAT | GO:0008202 | Steroid metabolic process | OSBPL3, HMGCR, FDPS, LSS, SC4MOL, APOB, APOA1, LCAT, CYP7A1, INSIG1, OSBPL10, VLDLR, DHCR24 | 8.40E-05 |
SP_PIR_KEYWORDS | Â | Cholesterol metabolism | APOB, APOA1, LCAT, INSIG1, VLDLR | 7.97E-04 |
GOTERM_BP_FAT | GO:0006869 | Lipid transport | APOB, TPRXL, APOA1, PPARG, ANXA1, ATP11A, CETP, VTG2, ATP8B3, VLDLR | 8.29E-04 |
GOTERM_BP_FAT | GO:0016126 | Sterol biosynthetic process | HMGCR, FDPS, LSS, SC4MOL, DHCR24 | 8.92E-04 |
SP_PIR_KEYWORDS | Â | Steroid metabolism | APOB, APOA1, LCAT, INSIG1, VLDLR | 0.00150 |
GOTERM_CC_FAT | GO:0032994 | Protein-lipid complex | APOB, APOA1, CETP, APOVLDLII, VLDLR | 0.00155 |
GOTERM_CC_FAT | GO:0034358 | Plasma lipoprotein particle | APOB, APOA1, CETP, APOVLDLII, VLDLR | 0.00155 |
GOTERM_BP_FAT | GO:0010876 | Lipid localization | APOB, TPRXL, APOA1, PPARG, ANXA1, ATP11A, CETP, VTG2, ATP8B3, VLDLR | 0.00167 |
GOTERM_BP_FAT | GO:0006695 | Cholesterol biosynthetic process | HMGCR, FDPS, LSS, DHCR24 | 0.00432 |
SP_PIR_KEYWORDS | Â | VLDL | APOB, APOVLDLII, VLDLR | 0.02855 |
GOTERM_CC_FAT | GO:0034361 | Very-low-density lipoprotein particle | APOB, APOVLDLII, VLDLR | 0.03533 |
GOTERM_CC_FAT | GO:0034385 | Triglyceride-rich lipoprotein particle | APOB, APOVLDLII, VLDLR | 0.03533 |
GOTERM_BP_FAT | GO:0006694 | Steroid biosynthetic process | HMGCR, FDPS, LSS, SC4MOL, DHCR24 | 0.04625 |
SP_PIR_KEYWORDS | Â | Lipid transport | APOB, APOA1, VLDLR | 0.10992 |