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Table 6 QTLs for fruit quality traits detected by interval mapping

From: A dense SNP genetic map constructed using restriction site-associated DNA sequencing enables detection of QTLs controlling apple fruit quality

Trait Year QTL Map/Linkage group LOD Exp (%) Peak location (cM) Intervals on maps (cM) QTL-associated markers
Malic acid 2011 qtlma.j8 J8 7.7 39.1 57.27 55.27 ~ 59.15 emC08.14121899
         emC08.13666872
Citric acid 2011 qtlc.g8 G8 3.7 19.4 46.58 46.13 ~ 47.98 huM001766.113.1072
  2011 qtlc.j8 J8 5.5 27.2 59.15 55.27 ~ 62.15 emC08.14121899
  2011 qtlc.j15 J15 3.6 20.2 64.01 63.42 ~ 64.97 huC15.29186826
Acetic acid 2011 qtla.j7 J7 3.7 20.1 59.83 59.13 ~ 60.83 euLG07_014
Total acid 2011 qtlta.j8 J8 7.7 39.2 57.27 55.27 ~ 59.15 emC08.14121899
         emC08.13666872
Fructose 2011 qtlf.j1 J1 4.3 28.5 37.82 32.81 ~ 42.74 huC01.18233570
         emC01.11115376
Sucrose 2011 qtls.g1 G1 3.5 17.5 49.57 48.60 ~ 50.57 huC01.18378291
Fruit weight 2008 qtlfw.j3 J3 3.7 11.2 24.65 24.28 ~ 25.39 hmC03.5431144
2008 qtlfw.j5 J5 3.8 11 53.86 52.86 ~ 54.86 euC05.25996313
Fruit firmness 2010 qtlff.j11a J11 4.4 27.5 24.60 22.21 ~ 26.43 euC11.7408490
        huC11.10309880
  2010 qtlff.j11b J11 3.9 21.6 11.48 10.48 ~ 13.30 euC11.5719084
         hmC11.4173064
  1. The phenotyping data were collected from the mapping population derived from ‘Jonathan’ × ‘Golden Delicious’ in 2008 to 2011. QTL intervals were the ranges that above the LOD threshold of 3.5 at a 95 % confidence level. Markers located at or flanked with the peak LOD value of a QTL were recognized as QTL-associated markers. J Jonathan, G Golden Delicious