| |
C. subterraneus subsp. pacificus
|
C. subterraneus subsp. tengcongensis
|
C. subterraneus subsp. yonseiensis
|
|---|
|
Genome size (Mb)
|
2.39
|
2.69
|
2.7
|
|
Genome GC content (%)
|
37.7
|
37.8
|
37.7
|
|
Number of contigs
|
135
|
1 (complete chromosome)
|
102
|
|
CDS
|
2511
|
2588
|
2711
|
|
Operon
|
871
|
1291
|
880
|
|
Hypothetical proteinsa
|
962 (38.31 %)
|
855 (33.04 %)
|
836 (30.84 %)
|
|
Average gene length
|
819
|
905
|
834
|
|
rRNA
|
11
|
12
|
18
|
|
rRNA average GC content (%)
|
59.8
|
59.81
|
59.3
|
|
tRNA
|
49
|
56
|
59
|
|
tRNA average GC content (%)
|
60.26
|
60.12
|
59.98
|
|
Number of horizontally transferred CDSsb
|
173 (6.88 %)
|
121 (4.67 %)
|
127 (4.68 %)
|
|
Origin
|
Pacific Ocean hot vents
|
Terrestrial hot spring
|
Geothermal hot stream
|
|
Reference
|
This study
|
[12]
|
[14]
|
-
aPercentage of hypothetical proteins of all genome proteins is in parentheses
-
bDetected by GOHTAM. In parentheses is the percentage of horizontally transferred CDSs of all CDSs present in the genome
