C. sakazakii strain
|
Genbank accession
|
Pulsotype
|
Sequence typea
|
Neonate
|
Symptoms
|
Isolation date (1994)
|
Day
|
Isolation site
|
SNP differences from index strain
|
---|
699
|
JOLK00000000
|
1
|
12
|
A
|
No details
|
23-Mar
|
1
|
Trachea
|
Index strain
|
703
|
JOLY00000000
|
1
|
12
|
B
|
NECII
|
25-Apr
|
34
|
Trachea
|
63
|
708
|
JOLZ00000000
|
1
|
12
|
C
|
No-symptoms
|
09-May
|
48
|
Trachea
|
52
|
696
|
JOLW00000000
|
1
|
12
|
D
|
NECII
|
08-Jun
|
78
|
Stools
|
14
|
690
|
JOLN00000000
|
1
|
12
|
E
|
No-symptoms
|
19-Jun
|
89
|
Stools
|
64
|
701
|
LCWW00000000
|
2
|
4
|
F
|
NEC III (died)
|
07-Apr
|
1
|
Peritoneal fluid
|
Index strain
|
691
|
JOLQ00000000
|
2
|
4
|
G
|
No details
|
19-Apr
|
12
|
Sputum
|
9
|
767
|
JNCX00000000
|
2
|
4
|
H
|
Meningitis (died)
|
11-May
|
34
|
Trachea
|
38
|
709
|
JOLJ00000000
|
2
|
4
|
C
|
Septicaemia
|
12-May
|
35
|
Trachea
|
13
|
705
|
JOLI00000000
|
2
|
4
|
B
|
NEC II
|
24-May
|
47
|
Trachea
|
339
|
695
|
JOLG00000000
|
2
|
4
|
J
|
NEC II (died)
|
07-Jun
|
61
|
Trachea
|
11
|
706
|
JOLH00000000
|
2
|
4
|
B
|
NEC II
|
09-Jun
|
63
|
Stools
|
304
|
692
|
JOLV00000000
|
2
|
4
|
L
|
NEC II
|
13-Jun
|
67
|
Stools
|
15
|
702
|
JOLF00000000
|
2
|
4
|
K
|
NEC I
|
13-Jun
|
67
|
Stools
|
10
|
694
|
JOLM00000000
|
2
|
4
|
M
|
NEC II
|
14-Jun
|
68
|
Conjunctivae
|
8
|
712
|
JOLE00000000
|
2
|
4
| | |
17-Jun
|
71
|
Prepared formula
|
6
|
707
|
JOLD00000000
|
2
|
4
|
B
|
NEC II
|
26-Jun
|
80
|
Skin
|
337
|
711
|
JOLC00000000
|
2
|
4
|
O
|
Asymptomatic
|
27-Jun
|
81
|
Stools
|
14
|
730
|
JOLT00000000
|
2
|
4
|
K
|
NEC I
|
27-Jun
|
81
|
Stools
|
10
|
698
|
JOLR00000000
|
2
|
4
|
D
|
NEC II
|
01-Jul
|
85
|
Stools
|
10
|
700
|
JOLL00000000
|
3
|
13
|
P
|
Digestive problems
|
15-Jun
|
1
|
Stools
|
Index strain
|
693
|
JOLO00000000
|
3
|
13
|
Q
|
Asymptomatic
|
18-Jun
|
3
|
Stools
|
4
|
713
|
JOLX00000000
|
3
|
13
| | |
20-Jun
|
5
|
End of bottle
|
4
|
714
|
JOLU00000000
|
3
|
13
| | |
27-Jun
|
12
|
End of bottle
|
3
|
715
|
JOLP00000000
|
3
|
13
| | |
27-Jun
|
12
|
Prepared formula
|
3
|
716
|
JOLS00000000
|
4
|
14
| | |
11-Jul
| |
Infant formula
| |
-
aForsythe et al. [2]
-
NEC necrotizing enterocolitis