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Table 1 General features of Azospirillum TCS genes

From: Genome-wide survey of two-component signal transduction systems in the plant growth-promoting bacterium Azospirillum

Strains and feature

TCS type

Chromosome

p1

p2

p3

p4

p5a

p6

Totalb

A. lipoferum 4B

         

Sensing HK

Classic HK

34

8

11

6

4

6

-

69

 

Hybrid HK

18

5

5

3

11

5

2

49

 

CheA

2

-

1

-

2

-

-

5

Output response

RR

61

9

18

9

15

9

-

121

Phosphotransfer

HisKA

-

-

-

-

-

-

-

-

 

Hpt

-

-

-

-

-

-

-

-

Total

 

115

22

35

18

32

20

2

244

ORF

 

2904

883

640

555

599

415

237

6233

Size (Mpb)

 

2.99

1.04

0.75

0.65

0.65

0.48

0.29

6.85

Azospirillum sp. B510

         

Sensing HK

Classic HK

31

13

6

10

4

11

-

75

 

HyHK

22

9

1

3

8

4

-

47

 

CheA

2

2

-

-

2

-

-

6

Output response

RR

60

23

7

13

15

14

-

132

Phosphotransfer

HisKA

-

-

-

-

-

-

-

-

 

Hpt

-

-

-

-

-

-

-

-

Total

 

115

47

14

26

29

29

 

260

ORF

 

3287

1263

693

589

598

464

232

7126

Size (Mpb)

 

3.31

1.46

0.72

0.68

0.63

0.54

0.26

7.60

A. brasilense Sp245

         

Sensing HK

Classic HK

31

22

8

5

7

1

-

74

 

HyHK

19

13

6

9

7

1

-

55

 

CheA

1

2

1

-

-

-

-

4

Output response

RR

47

37

19

9

11

1

-

124

Phosphotransfer

HisKA

-

-

-

-

-

-

-

0

 

Hpt

1

1

-

-

-

-

-

2

Total

 

99

75

34

23

25

3

-

259

ORF

 

3309

1812

922

824

691

163

125

7846

Size (Mpb)

 

3.02

1.77

0.91

0.78

0.69

0.19

0.17

7.53

A. brasilense CBG497

         

Sensing HK

Classic HK

26

17

9

4

4

-

-

60

 

HyHK

21

14

7

2

6

-

-

50

 

CheA

1

2

1

-

-

-

-

4

Output response

RR

47

32

20

5

7

-

-

111

Phosphotransfer

HisKA

1

-

-

-

-

-

-

1

 

Hpt

-

1

-

-

-

-

-

1

Total

 

96

66

37

11

17

-

-

227

ORF

 

2895

1430

643

512

583

-

122

6185

Size (Mpb)

 

2.90

1.60

0.73

0.49

0.60

-

0.15

6.47

  1. aAbsent in A. brasilense CBG497
  2. bFor each strain, the total number of TCS genes and genome size are highlighted in bold