Skip to main content

Table 2 Percentage of COG categories in each Aquimarina strain

From: Genomic insight into Aquimarina longa SW024T: its ultra-oligotrophic adapting mechanisms and biogeochemical functions

COG categories A. longa SW024T A. pacifica SW150T A. megaterium XH134T A. macrocephali JAMB N27T A. latercula DSM 2041T A. muelleri DSM 19832T A. agarilytica ZC1T
B 0.036 0.038 0.029 0.030 0.031 0.037 0.046
C 4.753 4.641 4.548 4.519 4.734 4.978 5.251
D 0.756 0.761 0.583 0.667 0.611 0.780 0.883
E 7.886 7.607 8.192 8.098 7.086 8.841 7.574
F 2.233 2.396 2.012 2.032 2.046 2.489 2.463
G 3.277 4.108 4.052 3.518 5.559 3.306 5.112
H 5.041 4.869 4.548 4.580 4.276 5.163 4.879
I 3.169 3.119 3.528 3.397 3.787 3.975 3.253
J 5.906 6.162 4.956 5.126 5.162 6.241 7.342
K 8.246 8.406 11.079 10.889 8.888 7.578 6.831
L 6.158 4.336 3.236 4.246 3.940 4.755 5.762
M 7.742 8.939 6.239 6.127 8.125 7.355 9.201
N 0.360 0.380 0.262 0.303 0.458 0.371 0.743
O 3.745 3.728 3.178 3.518 3.635 4.123 4.507
P 5.149 5.401 4.519 4.610 4.795 4.866 5.390
Q 2.953 3.081 3.761 3.518 3.451 4.383 2.138
R 13.936 13.998 14.519 14.680 14.508 14.042 13.151
S 8.714 7.950 7.872 8.432 8.522 7.912 7.667
T 6.482 6.618 8.542 7.583 6.659 5.498 4.926
U 1.296 1.445 1.137 1.092 1.100 1.226 1.115
V 2.161 2.016 3.178 3.033 2.627 2.043 1.766
W 0.000 0.000 0.029 0.000 0.000 0.037 0.000
  1. Function of COG categories: [B] Chromatin Structure and dynamics; [C] Energy production and conversion; [D] Cell cycle control, cell division, chromosome partitioning; [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism; [J] Translation, ribosomal structure and biogenesis; [K] Transcription; [L] Replication, recombination and repair; [M] Cell wall/membrane/envelope biogenesis; [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [P] Inorganic ion transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism; [R] General function prediction only; [S] Function unknown; [T] Signal transduction mechanisms; [U] Intracellular trafficking, secretion, and vesicular transport; [V] Defense mechanisms; [W] Extracellular structures